Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g080290.2.1 | Tomato | cytosol | 96.52 | 96.52 |
| AT1G75170.1 | Thale cress | cytosol | 71.78 | 69.59 |
| CDX73146 | Canola | cytosol | 70.03 | 69.55 |
| PGSC0003DMT400038571 | Potato | cytosol | 63.76 | 68.28 |
| KRH15219 | Soybean | cytosol | 67.25 | 67.48 |
| KRH05807 | Soybean | cytosol | 68.29 | 66.89 |
| GSMUA_AchrUn_... | Banana | cytosol | 65.51 | 65.96 |
| GSMUA_Achr4P03190_001 | Banana | cytosol | 59.23 | 60.71 |
| GSMUA_Achr8P26360_001 | Banana | cytosol | 62.72 | 60.61 |
| KRH61179 | Soybean | cytosol | 37.63 | 59.67 |
| KRH51858 | Soybean | nucleus, plastid | 41.12 | 58.13 |
| Bra015863.1-P | Field mustard | cytosol | 70.73 | 52.86 |
| CDY45413 | Canola | cytosol | 70.73 | 52.73 |
| KXG37682 | Sorghum | cytosol | 53.31 | 52.22 |
| Os03t0724100-01 | Rice | cytosol | 54.36 | 52.17 |
| EER93541 | Sorghum | cytosol | 53.66 | 51.85 |
| HORVU4Hr1G074380.1 | Barley | cytosol | 24.39 | 50.36 |
| TraesCS4A01G259700.1 | Wheat | cytosol | 51.22 | 50.34 |
| TraesCS4D01G055200.1 | Wheat | cytosol | 51.22 | 50.34 |
| HORVU4Hr1G009210.2 | Barley | cytosol | 50.87 | 50.0 |
| TraesCS4B01G055000.1 | Wheat | cytosol | 50.87 | 50.0 |
| Zm00001d033836_P001 | Maize | nucleus | 50.52 | 49.15 |
| TraesCS4A01G259600.1 | Wheat | cytosol | 49.48 | 48.63 |
| TraesCS4A01G259500.1 | Wheat | cytosol | 49.48 | 48.63 |
| TraesCS4D01G055400.1 | Wheat | cytosol | 49.48 | 48.63 |
| TraesCS4B01G055100.1 | Wheat | cytosol | 47.74 | 48.41 |
| TraesCS4D01G055300.1 | Wheat | cytosol | 49.13 | 48.29 |
| HORVU4Hr1G009310.1 | Barley | cytosol | 49.13 | 48.29 |
| HORVU4Hr1G009190.1 | Barley | cytosol | 49.13 | 48.29 |
| HORVU6Hr1G021650.1 | Barley | cytosol, mitochondrion, nucleus | 23.34 | 48.2 |
| TraesCS4D01G055100.1 | Wheat | cytosol | 34.84 | 47.85 |
| HORVU4Hr1G005090.2 | Barley | cytosol | 21.6 | 47.69 |
| TraesCS4B01G055200.1 | Wheat | cytosol | 48.43 | 47.6 |
| HORVU5Hr1G114590.3 | Barley | mitochondrion | 20.21 | 47.54 |
| TraesCS7B01G089700.1 | Wheat | cytosol | 46.34 | 47.0 |
| KXG37681 | Sorghum | cytosol | 50.17 | 46.6 |
| HORVU3Hr1G080050.1 | Barley | cytosol, mitochondrion, plastid | 23.69 | 43.59 |
| HORVU5Hr1G020290.3 | Barley | plastid | 23.0 | 43.14 |
| Zm00001d033837_P001 | Maize | plastid | 42.16 | 40.6 |
| PGSC0003DMT400024527 | Potato | cytosol | 43.9 | 38.18 |
| PGSC0003DMT400018571 | Potato | cytosol | 41.12 | 36.09 |
| PGSC0003DMT400058687 | Potato | cytosol | 22.3 | 26.67 |
| PGSC0003DMT400036745 | Potato | cytosol | 24.39 | 25.83 |
| PGSC0003DMT400058639 | Potato | cytosol | 16.38 | 23.15 |
| PGSC0003DMT400058682 | Potato | cytosol | 22.3 | 22.61 |
| PGSC0003DMT400046785 | Potato | mitochondrion | 19.86 | 21.76 |
| PGSC0003DMT400065724 | Potato | cytosol | 22.3 | 20.71 |
| PGSC0003DMT400058685 | Potato | cytosol | 13.24 | 18.91 |
| PGSC0003DMT400077340 | Potato | cytosol | 23.69 | 16.08 |
Protein Annotations
| Gene3D:3.40.525.10 | MapMan:35.2 | ProteinID:ABC01895 | ProteinID:ABC01895.1 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf |
| InterPro:CRAL/TRIO_N_dom | InterPro:CRAL/TRIO_N_dom_sf | ncoils:Coil | EMBL:DQ294263 | InterPro:IPR001251 | InterPro:IPR036865 |
| UniProt:M1A2G8 | PFAM:PF00650 | PFAM:PF03765 | EnsemblPlantsGene:PGSC0003DMG400005155 | PGSC:PGSC0003DMG400005155 | EnsemblPlants:PGSC0003DMT400013200 |
| PRINTS:PR00180 | PFscan:PS50191 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF206 | SMART:SM00516 | SMART:SM01100 |
| SUPFAM:SSF46938 | SUPFAM:SSF52087 | UniParc:UPI00029500FD | : | : | : |
Description
Transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400005155]
Coordinates
chr4:+:69690316..69694986
Molecular Weight (calculated)
33208.5 Da
IEP (calculated)
9.208
GRAVY (calculated)
-0.673
Length
287 amino acids
Sequence
(BLAST)
(BLAST)
001: MFRRKNHSNS EQGVEDQQQK VKELRASLGQ LSGRSTQFCT DACLKRFLEA RNWNVDKAKK MLEETLKWRL SFKPEEIRWN EVAKEGETGK VFKANFHDRH
101: GRTVLILRPG MQNTAALDNQ MKHLVYLIEN AIFNLPEGQE QMVWLIDFTG WSITNNVPVK SARESINILQ NHYPERLAAA ILYNPPRLFE TFWRIVKYFM
201: DPKTFQKVKF VYPKNKDSAE LMKSYFDVDN LPTEFGGTAT LNYDHEEFSR LMAQDDVKAA KFWGKDKHPP GPGGNGSYSA VEVAPEP
101: GRTVLILRPG MQNTAALDNQ MKHLVYLIEN AIFNLPEGQE QMVWLIDFTG WSITNNVPVK SARESINILQ NHYPERLAAA ILYNPPRLFE TFWRIVKYFM
201: DPKTFQKVKF VYPKNKDSAE LMKSYFDVDN LPTEFGGTAT LNYDHEEFSR LMAQDDVKAA KFWGKDKHPP GPGGNGSYSA VEVAPEP
001: MFRWKNSSQT EQEQKEAALR EAKMKELKTL IGQLSGRNSL YCSDACLKRY LEARNWNVGK AKKMLEETLK WRSSFKPEEI RWNEVSGEGE TGKVYKAGFH
101: DRHGRTVLIL RPGLQNTKSL ENQMKHLVYL IENAILNLPE DQEQMSWLID FTGWSMSTSV PIKSARETIN ILQNHYPERL AVAFLYNPPR LFEAFWKIVK
201: YFIDAKTFVK VKFVYPKNSE SVELMSTFFD EENLPTEFGG KALLQYNYEE FSKQMNQDDV KTANFWGLGH SNNNQLHASN GFSGAEIAPE PIQNHP
101: DRHGRTVLIL RPGLQNTKSL ENQMKHLVYL IENAILNLPE DQEQMSWLID FTGWSMSTSV PIKSARETIN ILQNHYPERL AVAFLYNPPR LFEAFWKIVK
201: YFIDAKTFVK VKFVYPKNSE SVELMSTFFD EENLPTEFGG KALLQYNYEE FSKQMNQDDV KTANFWGLGH SNNNQLHASN GFSGAEIAPE PIQNHP
Arabidopsis Description
Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:Q9FRK8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.