Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g072810.2.1 | Tomato | cytosol | 90.0 | 91.1 |
| CDY38239 | Canola | cytosol | 13.03 | 68.25 |
| Bra012311.1-P | Field mustard | cytosol | 53.64 | 58.03 |
| CDY00428 | Canola | cytosol | 53.64 | 58.03 |
| CDY56380 | Canola | cytosol | 53.33 | 57.7 |
| AT4G08690.2 | Thale cress | cytosol | 50.91 | 55.81 |
| KRH18888 | Soybean | cytosol | 56.06 | 55.56 |
| KRH53100 | Soybean | cytosol | 46.06 | 55.47 |
| KRH16691 | Soybean | cytosol | 55.76 | 55.42 |
| Bra000655.1-P | Field mustard | cytosol | 51.82 | 55.34 |
| AT1G22180.4 | Thale cress | cytosol | 52.12 | 54.78 |
| CDX90694 | Canola | cytosol | 51.21 | 54.69 |
| KRH62380 | Soybean | cytosol | 44.85 | 54.01 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 51.52 | 53.97 |
| CDY05023 | Canola | cytosol | 51.21 | 53.82 |
| CDY21345 | Canola | cytosol | 52.42 | 53.73 |
| Bra031370.1-P | Field mustard | cytosol | 52.42 | 53.73 |
| CDY38240 | Canola | peroxisome | 23.33 | 53.1 |
| VIT_18s0001g05080.t01 | Wine grape | nucleus | 56.67 | 51.8 |
| CDY12289 | Canola | cytosol | 31.52 | 49.29 |
| GSMUA_Achr3P04420_001 | Banana | cytosol | 49.39 | 48.8 |
| EES05517 | Sorghum | cytosol | 50.91 | 48.0 |
| KRH62383 | Soybean | cytosol | 49.09 | 47.23 |
| PGSC0003DMT400018571 | Potato | cytosol | 46.67 | 47.09 |
| Zm00001d052231_P003 | Maize | cytosol | 49.7 | 46.86 |
| Os02t0752000-01 | Rice | cytosol | 51.82 | 45.24 |
| PGSC0003DMT400013200 | Potato | cytosol | 38.18 | 43.9 |
| PGSC0003DMT400038571 | Potato | cytosol | 35.45 | 43.66 |
| TraesCS6D01G281700.1 | Wheat | nucleus | 49.09 | 41.22 |
| TraesCS6B01G331400.1 | Wheat | nucleus | 50.0 | 40.94 |
| HORVU6Hr1G075070.1 | Barley | nucleus | 50.0 | 40.94 |
| TraesCS6A01G302200.1 | Wheat | nucleus | 49.7 | 40.69 |
| PGSC0003DMT400036745 | Potato | cytosol | 21.52 | 26.2 |
| PGSC0003DMT400058687 | Potato | cytosol | 18.79 | 25.83 |
| PGSC0003DMT400058639 | Potato | cytosol | 14.85 | 24.14 |
| PGSC0003DMT400046785 | Potato | mitochondrion | 18.18 | 22.9 |
| PGSC0003DMT400058682 | Potato | cytosol | 18.79 | 21.91 |
| PGSC0003DMT400065724 | Potato | cytosol | 19.7 | 21.04 |
| PGSC0003DMT400058685 | Potato | cytosol | 12.42 | 20.4 |
| PGSC0003DMT400077340 | Potato | cytosol | 22.12 | 17.26 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400024527 | EnsemblPlantsGene:PGSC0003DMG400009482 | EntrezGene:102606331 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf |
| InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF202 | PFAM:PF00650 |
| PFscan:PS50191 | PGSC:PGSC0003DMG400009482 | RefSeq:XP_006354013.1 | RefSeq:XP_015167097.1 | SEG:seg | SMART:SM00516 |
| SUPFAM:SSF46938 | SUPFAM:SSF52087 | UniParc:UPI00029690EC | UniProt:M1AKA1 | MapMan:35.2 | : |
Description
Transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400009482]
Coordinates
chr4:-:62630354..62635755
Molecular Weight (calculated)
37759.6 Da
IEP (calculated)
4.751
GRAVY (calculated)
-0.672
Length
330 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTGPTKPTP NGFENSLRPE EEQNKIDEMR KLIGPLSGKL ALYCSDASIS RYLVAQSWNV KKAAKMLKAS LKWRLDFKPE EIRWDDVASE AETGKIYRSN
101: YKDKHGRPVL VMRPRCQNTK SVEGQMKYLV YCMENAVVNL PEDQEQMIWL VDFHGYTLSN FSIKVTKETA HILQDYYPER LGIAILYDAP KIFEPFWKLA
201: KPFLDPKTVS KVQFMYSEDP NSKKMMEELF DMSLVESAFG GDDKADFDVN KYAERMREDD KKLSAFWKKD DSSASNAQPT VTADPSLEPT NSDSDSEVLD
301: EKVEKPSLDV DEEELSIEET LPRTANVKAV
101: YKDKHGRPVL VMRPRCQNTK SVEGQMKYLV YCMENAVVNL PEDQEQMIWL VDFHGYTLSN FSIKVTKETA HILQDYYPER LGIAILYDAP KIFEPFWKLA
201: KPFLDPKTVS KVQFMYSEDP NSKKMMEELF DMSLVESAFG GDDKADFDVN KYAERMREDD KKLSAFWKKD DSSASNAQPT VTADPSLEPT NSDSDSEVLD
301: EKVEKPSLDV DEEELSIEET LPRTANVKAV
001: MNSDSNKSSS NGFEKSLTPE EYLNKINEVR TLLGPLTEKS SEFCSDAAIT RYLAARNGHV KKATKMLKET LKWRAQYKPE EIRWEEIARE AETGKIYRAN
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT
Arabidopsis Description
F16L1.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LM14]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.