Factsheet for AT1G22180.4

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY00428	Canola	cytosol	83.12	85.57
Bra012311.1-P	Field mustard	cytosol	82.8	85.25
CDY56380	Canola	cytosol	82.48	84.92
CDY38239	Canola	cytosol	16.88	84.13
CDY38240	Canola	peroxisome	36.62	79.31
CDY21345	Canola	cytosol	80.57	78.57
Bra031370.1-P	Field mustard	cytosol	80.57	78.57
KRH18888	Soybean	cytosol	64.01	60.36
AT4G08690.2	Thale cress	cytosol	57.64	60.13
KRH16691	Soybean	cytosol	63.06	59.64
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	56.05	55.87
KRH53100	Soybean	cytosol	48.73	55.84
KRH62380	Soybean	cytosol	48.09	55.11
VIT_18s0001g05080.t01	Wine grape	nucleus	63.06	54.85
GSMUA_Achr3P04420_001	Banana	cytosol	55.73	52.4
Solyc04g072810.2.1	Tomato	cytosol	54.14	52.15
PGSC0003DMT400024527	Potato	cytosol	54.78	52.12
EES05517	Sorghum	cytosol	52.55	47.14
KRH62383	Soybean	cytosol	50.96	46.65
Os02t0752000-01	Rice	cytosol	55.73	46.3
Zm00001d052231_P003	Maize	cytosol	51.59	46.29
AT1G75170.1	Thale cress	cytosol	43.31	45.95
TraesCS6D01G281700.1	Wheat	nucleus	54.78	43.77
AT4G36640.3	Thale cress	cytosol	40.45	43.2
TraesCS6A01G302200.1	Wheat	nucleus	55.1	42.93
HORVU6Hr1G075070.1	Barley	nucleus	54.46	42.43
TraesCS6B01G331400.1	Wheat	nucleus	53.82	41.94
AT1G01630.1	Thale cress	cytosol	21.02	25.88
AT1G14820.3	Thale cress	cytosol	18.15	22.62
AT5G63060.1	Thale cress	plastid	18.79	22.43
AT1G05370.1	Thale cress	cytosol	23.57	17.75
AT3G22410.1	Thale cress	cytosol	22.29	17.5

Protein Annotations

Gene3D:3.40.525.10	MapMan:35.2	EntrezGene:838823	ProteinID:AAF87855.1	ProteinID:AEE30208.1	ProteinID:ANM60619.1
ArrayExpress:AT1G22180	EnsemblPlantsGene:AT1G22180	RefSeq:AT1G22180	TAIR:AT1G22180	RefSeq:AT1G22180-TAIR-G	EnsemblPlants:AT1G22180.4
Unigene:At.43225	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	GO:GO:0003674
GO:GO:0008150	InterPro:IPR001251	InterPro:IPR036865	RefSeq:NP_001322892.1	RefSeq:NP_173637.3	PFAM:PF00650
PFscan:PS50191	PANTHER:PTHR10174	PANTHER:PTHR10174:SF202	UniProt:Q9LM14	SMART:SM00516	SMART:SM01100
SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI00000A5A66	SEG:seg	:	:

Description

F16L1.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LM14]

Coordinates

chr1:-:7828434..7830424

Molecular Weight (calculated)

36156.6 Da

IEP (calculated)

5.522

GRAVY (calculated)

-0.708

Length

314 amino acids

Sequence
(BLAST)

001: MNSDSNKSSS NGFEKSLTPE EYLNKINEVR TLLGPLTEKS SEFCSDAAIT RYLAARNGHV KKATKMLKET LKWRAQYKPE EIRWEEIARE AETGKIYRAN
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.