Factsheet for Bra012311.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY56380	Canola	cytosol	99.67	99.67
CDY00428	Canola	cytosol	96.07	96.07
AT1G22180.4	Thale cress	cytosol	85.25	82.8
Bra031370.1-P	Field mustard	cytosol	84.92	80.43
KRH16691	Soybean	cytosol	64.59	59.34
KRH18888	Soybean	cytosol	64.26	58.86
Bra000655.1-P	Field mustard	cytosol	59.34	58.58
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	59.02	57.14
KRH53100	Soybean	cytosol	49.84	55.47
VIT_18s0001g05080.t01	Wine grape	nucleus	65.57	55.4
KRH62380	Soybean	cytosol	49.18	54.74
Solyc04g072810.2.1	Tomato	cytosol	57.7	53.99
PGSC0003DMT400024527	Potato	cytosol	58.03	53.64
GSMUA_Achr3P04420_001	Banana	cytosol	58.03	52.99
EES05517	Sorghum	cytosol	56.07	48.86
Zm00001d052231_P003	Maize	cytosol	55.08	48.0
KRH62383	Soybean	cytosol	52.79	46.94
Os02t0752000-01	Rice	cytosol	56.39	45.5
Bra010566.1-P	Field mustard	cytosol	43.28	45.05
Bra011696.1-P	Field mustard	nucleus	42.3	44.48
TraesCS6D01G281700.1	Wheat	nucleus	56.72	44.02
Bra017768.1-P	Field mustard	cytosol	40.98	43.25
TraesCS6A01G302200.1	Wheat	nucleus	56.72	42.93
TraesCS6B01G331400.1	Wheat	nucleus	55.74	42.18
HORVU6Hr1G075070.1	Barley	nucleus	55.74	42.18
Bra015863.1-P	Field mustard	cytosol	43.93	34.9
Bra032645.1-P	Field mustard	cytosol	20.98	27.71
Bra033247.1-P	Field mustard	cytosol	22.3	26.67
Bra035864.1-P	Field mustard	plastid	20.33	24.41
Bra026185.1-P	Field mustard	cytosol	19.34	24.08
Bra026802.1-P	Field mustard	cytosol	15.41	22.71
Bra026803.1-P	Field mustard	cytosol	17.38	20.87
Bra023828.1-P	Field mustard	nucleus	23.28	17.53
Bra039949.1-P	Field mustard	cytosol	22.95	17.46
Bra015421.1-P	Field mustard	cytosol	22.62	17.16
Bra032465.1-P	Field mustard	cytosol	22.95	16.83

Protein Annotations

EnsemblPlants:Bra012311.1	EnsemblPlants:Bra012311.1-P	EnsemblPlantsGene:Bra012311	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR10174	PANTHER:PTHR10174:SF202
PFAM:PF00650	PFscan:PS50191	SEG:seg	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938
SUPFAM:SSF52087	UniParc:UPI00025414A0	UniProt:M4D751	MapMan:35.2	:	:

Description

AT1G22180 (E=6e-143) | SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein

Coordinates

chrA07:+:8622176..8623479

Molecular Weight (calculated)

35150.7 Da

IEP (calculated)

7.115

GRAVY (calculated)

-0.687

Length

305 amino acids

Sequence
(BLAST)

001: MSLGTKGSSS SGFENTSPPE DYLNKINEVR TLLGPLIGKS SEYCSDAAIT RYLAARNGHV KKATKMLKET LKWRTQYKPR EIRWEEIARE AETGKIYRSN
101: YTDKYGRPVL VMRPSCQNTK SPKGQIRFLV YCMENAILNL PDNQEQMVWL IDFHGFNMSH LSIKVSRETA HVLQEHYPER LGLAILYNPP KIFEPFWKMV
201: KPFLEPKTCN KVKFVYSDDN VSKKILEDIF DMEQLEVAFG GENSDSSFNF EKYAERMRED DLKFYGNTPV SSTSAHFTNS DSEVSDTEMK RLDDIPDEKI
301: KNGTS

Best Arabidopsis Sequence Match ( AT1G22180.4 )
(BLAST)

001: MNSDSNKSSS NGFEKSLTPE EYLNKINEVR TLLGPLTEKS SEFCSDAAIT RYLAARNGHV KKATKMLKET LKWRAQYKPE EIRWEEIARE AETGKIYRAN
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT

Arabidopsis Description

F16L1.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LM14]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.