Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P04420_001 | Banana | cytosol | 72.06 | 67.96 |
| CDY38239 | Canola | cytosol | 13.02 | 65.08 |
| Bra012311.1-P | Field mustard | cytosol | 57.14 | 59.02 |
| CDY56380 | Canola | cytosol | 56.83 | 58.69 |
| CDY00428 | Canola | cytosol | 56.19 | 58.03 |
| KRH16691 | Soybean | cytosol | 59.68 | 56.63 |
| KRH18888 | Soybean | cytosol | 59.37 | 56.16 |
| AT1G22180.4 | Thale cress | cytosol | 55.87 | 56.05 |
| AT4G08690.2 | Thale cress | cytosol | 53.02 | 55.48 |
| VIT_18s0001g05080.t01 | Wine grape | nucleus | 63.17 | 55.12 |
| CDY21345 | Canola | cytosol | 56.19 | 54.97 |
| Bra031370.1-P | Field mustard | cytosol | 56.19 | 54.97 |
| CDY38240 | Canola | peroxisome | 24.76 | 53.79 |
| Bra000655.1-P | Field mustard | cytosol | 52.7 | 53.72 |
| CDX90694 | Canola | cytosol | 52.06 | 53.07 |
| CDY05023 | Canola | cytosol | 52.7 | 52.87 |
| EES05517 | Sorghum | cytosol | 58.41 | 52.57 |
| Zm00001d052231_P003 | Maize | cytosol | 57.46 | 51.71 |
| Solyc04g072810.2.1 | Tomato | cytosol | 53.33 | 51.53 |
| PGSC0003DMT400024527 | Potato | cytosol | 53.97 | 51.52 |
| KRH53100 | Soybean | cytosol | 44.44 | 51.09 |
| GSMUA_Achr8P01630_001 | Banana | cytosol | 55.24 | 50.0 |
| Os02t0752000-01 | Rice | cytosol | 60.0 | 50.0 |
| KRH62380 | Soybean | cytosol | 43.17 | 49.63 |
| CDY12289 | Canola | cytosol | 33.02 | 49.29 |
| TraesCS6D01G281700.1 | Wheat | nucleus | 60.95 | 48.85 |
| TraesCS6B01G331400.1 | Wheat | nucleus | 60.32 | 47.15 |
| TraesCS6A01G302200.1 | Wheat | nucleus | 60.32 | 47.15 |
| HORVU6Hr1G075070.1 | Barley | nucleus | 60.0 | 46.9 |
| KRH62383 | Soybean | cytosol | 49.84 | 45.77 |
| GSMUA_AchrUn_... | Banana | cytosol | 40.95 | 45.26 |
| GSMUA_Achr4P03190_001 | Banana | cytosol | 39.68 | 44.64 |
| GSMUA_Achr10P... | Banana | nucleus | 52.7 | 43.57 |
| GSMUA_Achr8P26360_001 | Banana | cytosol | 40.32 | 42.76 |
| GSMUA_Achr9P17070_001 | Banana | cytosol | 52.38 | 39.86 |
| GSMUA_Achr11P... | Banana | cytosol | 18.73 | 23.98 |
| GSMUA_Achr8P00480_001 | Banana | cytosol | 16.83 | 23.66 |
| GSMUA_Achr4P15920_001 | Banana | cytosol | 17.14 | 20.53 |
| GSMUA_Achr3P14480_001 | Banana | mitochondrion | 16.51 | 19.85 |
| GSMUA_Achr7P27040_001 | Banana | cytosol | 20.63 | 14.94 |
| GSMUA_Achr3P29630_001 | Banana | cytosol | 20.0 | 14.72 |
| GSMUA_Achr6P25200_001 | Banana | cytosol | 19.05 | 14.08 |
| GSMUA_Achr5P08620_001 | Banana | nucleus | 20.63 | 14.01 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P24490_001 | EnsemblPlants:GSMUA_Achr10T24490_001 | EnsemblPlantsGene:GSMUA_Achr10G24490_001 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf |
| InterPro:CRAL/TRIO_N_dom | InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF202 |
| PFAM:PF00650 | PFscan:PS50191 | SMART:SM00516 | SMART:SM01100 | SUPFAM:SSF46938 | SUPFAM:SSF52087 |
| UniParc:UPI0002954071 | UniProt:M0RL24 | MapMan:35.2 | : | : | : |
Description
CRAL/TRIO domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G24490_001]
Coordinates
chr10:-:28926447..28930800
Molecular Weight (calculated)
36513.2 Da
IEP (calculated)
6.571
GRAVY (calculated)
-0.728
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRNLQRSMS SVMYEAIGSE ESSFSEEQRA KINEVRASLG KLPDKLFLYS SDASLARYLT ARNWNVKKTT KMLNDTLKWR LEYKPEEIRW DEVAHEAETG
101: KIYRSSYSDK YGRSILVMRP GCQNTKSTKG QIRYLVYCME NAILNLPPDQ EQMVWVIDFQ EFNLSNISLK VTKETADVLQ NHYPERLALA ILYNPPKFFE
201: PFWMMAKPFL EPKTYKKVKF VYSDDNGTKK IMEDLFNVDE LDCAFGGNNQ VSFNIDDYAA RMREDDKRMP LLWKRSNSSS SDKQLPATTP DVSLGKSASD
301: SDEPEKEIDG QVRNN
101: KIYRSSYSDK YGRSILVMRP GCQNTKSTKG QIRYLVYCME NAILNLPPDQ EQMVWVIDFQ EFNLSNISLK VTKETADVLQ NHYPERLALA ILYNPPKFFE
201: PFWMMAKPFL EPKTYKKVKF VYSDDNGTKK IMEDLFNVDE LDCAFGGNNQ VSFNIDDYAA RMREDDKRMP LLWKRSNSSS SDKQLPATTP DVSLGKSASD
301: SDEPEKEIDG QVRNN
001: MNSDSNKSSS NGFEKSLTPE EYLNKINEVR TLLGPLTEKS SEFCSDAAIT RYLAARNGHV KKATKMLKET LKWRAQYKPE EIRWEEIARE AETGKIYRAN
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT
Arabidopsis Description
F16L1.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LM14]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.