Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P27040_001 | Banana | cytosol | 81.31 | 80.0 |
| GSMUA_Achr6P25200_001 | Banana | cytosol | 70.09 | 70.42 |
| Os03t0219100-01 | Rice | cytosol | 69.39 | 67.81 |
| GSMUA_Achr5P08620_001 | Banana | nucleus | 69.63 | 64.22 |
| VIT_05s0020g03350.t01 | Wine grape | cytosol | 63.08 | 63.83 |
| TraesCS4D01G242900.1 | Wheat | cytosol | 65.65 | 62.58 |
| TraesCS4B01G243300.1 | Wheat | cytosol | 65.89 | 62.39 |
| EER95261 | Sorghum | cytosol | 64.72 | 62.39 |
| KRG91288 | Soybean | cytosol | 58.64 | 62.13 |
| KRH35529 | Soybean | cytosol | 58.64 | 62.13 |
| TraesCS4A01G065900.1 | Wheat | cytosol | 65.89 | 61.44 |
| Zm00001d048066_P001 | Maize | cytosol | 62.62 | 61.33 |
| Zm00001d028231_P003 | Maize | cytosol | 64.72 | 61.28 |
| PGSC0003DMT400077340 | Potato | cytosol | 58.41 | 59.1 |
| Solyc09g075970.2.1 | Tomato | cytosol | 57.01 | 57.68 |
| Bra032465.1-P | Field mustard | cytosol | 54.21 | 55.77 |
| AT1G05370.1 | Thale cress | cytosol | 54.21 | 55.64 |
| CDY59787 | Canola | cytosol | 53.97 | 55.53 |
| CDY10026 | Canola | cytosol | 53.5 | 55.05 |
| CDY64658 | Canola | cytosol | 43.22 | 54.25 |
| Bra015421.1-P | Field mustard | cytosol | 50.47 | 53.73 |
| Bra039949.1-P | Field mustard | cytosol | 50.23 | 53.62 |
| AT3G22410.1 | Thale cress | cytosol | 49.07 | 52.5 |
| HORVU4Hr1G067410.4 | Barley | plastid | 59.81 | 51.3 |
| Bra023828.1-P | Field mustard | nucleus | 47.9 | 50.62 |
| CDY71148 | Canola | cytosol, mitochondrion, nucleus, plastid | 36.45 | 49.06 |
| CDY10103 | Canola | extracellular | 30.37 | 48.33 |
| CDY38325 | Canola | cytosol | 41.82 | 48.25 |
| CDY10638 | Canola | nucleus | 35.28 | 40.16 |
| GSMUA_Achr8P00480_001 | Banana | cytosol | 13.32 | 25.45 |
| GSMUA_Achr4P03190_001 | Banana | cytosol | 16.36 | 25.0 |
| GSMUA_Achr11P... | Banana | cytosol | 13.55 | 23.58 |
| GSMUA_AchrUn_... | Banana | cytosol | 15.65 | 23.51 |
| GSMUA_Achr4P15920_001 | Banana | cytosol | 13.55 | 22.05 |
| GSMUA_Achr8P26360_001 | Banana | cytosol | 14.95 | 21.55 |
| GSMUA_Achr8P01630_001 | Banana | cytosol | 16.36 | 20.11 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 14.72 | 20.0 |
| GSMUA_Achr3P14480_001 | Banana | mitochondrion | 11.68 | 19.08 |
| GSMUA_Achr10P... | Banana | nucleus | 16.12 | 18.11 |
| GSMUA_Achr3P04420_001 | Banana | cytosol | 13.79 | 17.66 |
| GSMUA_Achr9P17070_001 | Banana | cytosol | 15.65 | 16.18 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P29630_001 | EnsemblPlants:GSMUA_Achr3T29630_001 | EnsemblPlantsGene:GSMUA_Achr3G29630_001 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf |
| InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | ncoils:Coil | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF132 |
| PFAM:PF00650 | PFscan:PS50191 | SEG:seg | SMART:SM00516 | SUPFAM:SSF46938 | SUPFAM:SSF52087 |
| UniParc:UPI0002956192 | UniProt:M0SIX9 | MapMan:35.2 | : | : | : |
Description
SEC14 cytosolic factor family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G29630_001]
Coordinates
chr3:+:28698985..28701198
Molecular Weight (calculated)
48252.8 Da
IEP (calculated)
10.347
GRAVY (calculated)
-0.276
Length
428 amino acids
Sequence
(BLAST)
(BLAST)
001: MGMERKQPND RERIEAVLEI LKKQAPLTVK QEKFCNDACV EQFLRARGDS LKKAAKQLRA ALSWRESIGL DHLIADEFAA ELAGGLAYVA GHDDEARPVM
101: VFRIKQDYAK THSQKSFVRF LVFTLEVAIS SMSRFVDQFV ILFDASLFRS APAFLNLFMG TLKIISDYYP GRLHKAFVVD PPSLFSYLWK GVRPFVELSV
201: VTAVVSSLDF DDSIEDAAFA SCRTRAASLR FDPVVATTAR LGGSTSSRFS FTVSHLDSLK PWYLSTTTRA TPRAVMPTAS PSLVGASPLN ARSFSFASPA
301: ARSTPRASRS IPSTPCSFPP PTHPHQQQHP PRTPRPSFLQ SPATLFTFWK EGQAVVSRGE RERESFLPFL RFYRRPYDEM AYRAKMRPPF GGLISIISPH
401: LEQQQLQQQQ QRRDALNIHH QRTQTLTY
101: VFRIKQDYAK THSQKSFVRF LVFTLEVAIS SMSRFVDQFV ILFDASLFRS APAFLNLFMG TLKIISDYYP GRLHKAFVVD PPSLFSYLWK GVRPFVELSV
201: VTAVVSSLDF DDSIEDAAFA SCRTRAASLR FDPVVATTAR LGGSTSSRFS FTVSHLDSLK PWYLSTTTRA TPRAVMPTAS PSLVGASPLN ARSFSFASPA
301: ARSTPRASRS IPSTPCSFPP PTHPHQQQHP PRTPRPSFLQ SPATLFTFWK EGQAVVSRGE RERESFLPFL RFYRRPYDEM AYRAKMRPPF GGLISIISPH
401: LEQQQLQQQQ QRRDALNIHH QRTQTLTY
001: MGKKEQKDHH SVVESDDKVE AVLHLLRKHS PLTLKQEKFC NRACVGRFLR IKGDNVKKAA KQLRSCLSWR SSLGIESLIA DEFTAELAEG LAYVAGLDDE
101: CRPVLVFRIK QDYQKLHTQK QLTRLVVFTL EVAISTMSRN VEQFVILFDA SFFKSASAFM NILVTTLKIV AEYYPCRLFK TFVIDPPSLF SYLWKGIRTF
201: VDLSTATMIV SMQDFQDSFD YDDFSSSYPS RVSSLRFDTS SLKSTDKIGS CASSRFAFTV SRDGLDTVKP WCLTLTDTSS TKLGHNTGAY ISPLNARSFS
301: FASPAARSEP FGGPRRSFFA STPMPARTTD RHSIGTLRDP RIPRPSFFQS PAIFFRRESH VSKSEKPRDS FVQFLKFYRR PYDEMTYRSK MRPPLGGLVS
401: IVSTQIRRRH VSLSQRF
101: CRPVLVFRIK QDYQKLHTQK QLTRLVVFTL EVAISTMSRN VEQFVILFDA SFFKSASAFM NILVTTLKIV AEYYPCRLFK TFVIDPPSLF SYLWKGIRTF
201: VDLSTATMIV SMQDFQDSFD YDDFSSSYPS RVSSLRFDTS SLKSTDKIGS CASSRFAFTV SRDGLDTVKP WCLTLTDTSS TKLGHNTGAY ISPLNARSFS
301: FASPAARSEP FGGPRRSFFA STPMPARTTD RHSIGTLRDP RIPRPSFFQS PAIFFRRESH VSKSEKPRDS FVQFLKFYRR PYDEMTYRSK MRPPLGGLVS
401: IVSTQIRRRH VSLSQRF
Arabidopsis Description
Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:F4I8Q8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.