Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P08620_001 | Banana | nucleus | 78.17 | 71.77 |
| GSMUA_Achr3P29630_001 | Banana | cytosol | 70.42 | 70.09 |
| GSMUA_Achr7P27040_001 | Banana | cytosol | 69.95 | 68.51 |
| Os03t0219100-01 | Rice | cytosol | 68.08 | 66.21 |
| VIT_05s0020g03350.t01 | Wine grape | cytosol | 61.74 | 62.17 |
| Zm00001d048066_P001 | Maize | cytosol | 62.21 | 60.64 |
| EER95261 | Sorghum | cytosol | 63.15 | 60.59 |
| TraesCS4D01G242900.1 | Wheat | cytosol | 62.91 | 59.69 |
| Zm00001d028231_P003 | Maize | cytosol | 63.15 | 59.51 |
| TraesCS4B01G243300.1 | Wheat | cytosol | 62.91 | 59.29 |
| KRH35529 | Soybean | cytosol | 56.1 | 59.16 |
| KRG91288 | Soybean | cytosol | 55.87 | 58.91 |
| TraesCS4A01G065900.1 | Wheat | cytosol | 63.38 | 58.82 |
| PGSC0003DMT400077340 | Potato | cytosol | 56.57 | 56.97 |
| Solyc09g075970.2.1 | Tomato | cytosol | 55.63 | 56.03 |
| Bra039949.1-P | Field mustard | cytosol | 50.23 | 53.37 |
| Bra032465.1-P | Field mustard | cytosol | 51.88 | 53.12 |
| AT1G05370.1 | Thale cress | cytosol | 51.88 | 53.0 |
| CDY59787 | Canola | cytosol | 51.64 | 52.88 |
| CDY10026 | Canola | cytosol | 51.41 | 52.64 |
| AT3G22410.1 | Thale cress | cytosol | 48.59 | 51.75 |
| CDY64658 | Canola | cytosol | 41.31 | 51.61 |
| Bra015421.1-P | Field mustard | cytosol | 48.36 | 51.24 |
| Bra023828.1-P | Field mustard | nucleus | 48.12 | 50.62 |
| HORVU4Hr1G067410.4 | Barley | plastid | 57.04 | 48.7 |
| CDY71148 | Canola | cytosol, mitochondrion, nucleus, plastid | 36.15 | 48.43 |
| CDY38325 | Canola | cytosol | 41.78 | 47.98 |
| CDY10103 | Canola | extracellular | 29.11 | 46.1 |
| CDY10638 | Canola | nucleus | 34.98 | 39.63 |
| GSMUA_Achr4P03190_001 | Banana | cytosol | 15.73 | 23.93 |
| GSMUA_Achr8P00480_001 | Banana | cytosol | 12.44 | 23.66 |
| GSMUA_Achr11P... | Banana | cytosol | 13.38 | 23.17 |
| GSMUA_AchrUn_... | Banana | cytosol | 14.55 | 21.75 |
| GSMUA_Achr8P26360_001 | Banana | cytosol | 14.55 | 20.88 |
| GSMUA_Achr4P15920_001 | Banana | cytosol | 12.44 | 20.15 |
| GSMUA_Achr8P01630_001 | Banana | cytosol | 15.96 | 19.54 |
| GSMUA_Achr10P... | Banana | nucleus | 17.14 | 19.16 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 14.08 | 19.05 |
| GSMUA_Achr3P14480_001 | Banana | mitochondrion | 10.33 | 16.79 |
| GSMUA_Achr3P04420_001 | Banana | cytosol | 13.15 | 16.77 |
| GSMUA_Achr9P17070_001 | Banana | cytosol | 15.96 | 16.43 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P25200_001 | EnsemblPlants:GSMUA_Achr6T25200_001 | EnsemblPlantsGene:GSMUA_Achr6G25200_001 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf |
| InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF132 | PFAM:PF00650 |
| PFscan:PS50191 | SEG:seg | SMART:SM00516 | SUPFAM:SSF46938 | SUPFAM:SSF52087 | UniParc:UPI00029484C7 |
| UniProt:M0TA16 | MapMan:35.2 | : | : | : | : |
Description
SEC14 cytosolic factor family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G25200_001]
Coordinates
chr6:+:26254650..26256686
Molecular Weight (calculated)
47708.2 Da
IEP (calculated)
10.543
GRAVY (calculated)
-0.273
Length
426 amino acids
Sequence
(BLAST)
(BLAST)
001: MRAATEKKDP KDRERVEDVL GVLKKQAPLT VKQEKFCSYA CVERFLRAEG DSVKKVAKRL RAVLSWRESI GTDHLIADEF YGELADGMAY VAGHDDEARP
101: VMVFRIKQDY LKLRSQKSFL RLLVFTLEVA VSSMARNVDQ FVLLFDASYF RSPKSFLQLF MGTLKIISDY YPGRLHKAFV IDPPSLFSCL WKGVRPFVEL
201: SAVTAVVSSL DFEDSLEDGS FTSLLRTASF RFDPAAAKVG SSASSRFSFT VSHLNSLKPW YLSTATTTRS AVVPTASPSL IGASPLNARS FSFASSAPQS
301: TPWVGIAGAA ISRSIPSTPS SAPPCRPRQP QPRTPMPSFF QSPATLFSFK KEGRLSRVER ERESFLPFLR FYRRPYDEAV YRANMRPPLS GLTSIVSHHD
401: QLKQRRNKIQ SPALTASTKQ QRPPPH
101: VMVFRIKQDY LKLRSQKSFL RLLVFTLEVA VSSMARNVDQ FVLLFDASYF RSPKSFLQLF MGTLKIISDY YPGRLHKAFV IDPPSLFSCL WKGVRPFVEL
201: SAVTAVVSSL DFEDSLEDGS FTSLLRTASF RFDPAAAKVG SSASSRFSFT VSHLNSLKPW YLSTATTTRS AVVPTASPSL IGASPLNARS FSFASSAPQS
301: TPWVGIAGAA ISRSIPSTPS SAPPCRPRQP QPRTPMPSFF QSPATLFSFK KEGRLSRVER ERESFLPFLR FYRRPYDEAV YRANMRPPLS GLTSIVSHHD
401: QLKQRRNKIQ SPALTASTKQ QRPPPH
001: MGKKEQKDHH SVVESDDKVE AVLHLLRKHS PLTLKQEKFC NRACVGRFLR IKGDNVKKAA KQLRSCLSWR SSLGIESLIA DEFTAELAEG LAYVAGLDDE
101: CRPVLVFRIK QDYQKLHTQK QLTRLVVFTL EVAISTMSRN VEQFVILFDA SFFKSASAFM NILVTTLKIV AEYYPCRLFK TFVIDPPSLF SYLWKGIRTF
201: VDLSTATMIV SMQDFQDSFD YDDFSSSYPS RVSSLRFDTS SLKSTDKIGS CASSRFAFTV SRDGLDTVKP WCLTLTDTSS TKLGHNTGAY ISPLNARSFS
301: FASPAARSEP FGGPRRSFFA STPMPARTTD RHSIGTLRDP RIPRPSFFQS PAIFFRRESH VSKSEKPRDS FVQFLKFYRR PYDEMTYRSK MRPPLGGLVS
401: IVSTQIRRRH VSLSQRF
101: CRPVLVFRIK QDYQKLHTQK QLTRLVVFTL EVAISTMSRN VEQFVILFDA SFFKSASAFM NILVTTLKIV AEYYPCRLFK TFVIDPPSLF SYLWKGIRTF
201: VDLSTATMIV SMQDFQDSFD YDDFSSSYPS RVSSLRFDTS SLKSTDKIGS CASSRFAFTV SRDGLDTVKP WCLTLTDTSS TKLGHNTGAY ISPLNARSFS
301: FASPAARSEP FGGPRRSFFA STPMPARTTD RHSIGTLRDP RIPRPSFFQS PAIFFRRESH VSKSEKPRDS FVQFLKFYRR PYDEMTYRSK MRPPLGGLVS
401: IVSTQIRRRH VSLSQRF
Arabidopsis Description
Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:F4I8Q8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.