Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G22410.1 | Thale cress | cytosol | 77.9 | 72.25 |
| CDY71148 | Canola | cytosol, mitochondrion, nucleus, plastid | 56.6 | 66.04 |
| KRH35529 | Soybean | cytosol | 56.87 | 52.23 |
| KRG91288 | Soybean | cytosol | 56.06 | 51.49 |
| CDY59787 | Canola | cytosol | 55.8 | 49.76 |
| CDY10026 | Canola | cytosol | 55.53 | 49.52 |
| PGSC0003DMT400077340 | Potato | cytosol | 54.72 | 47.99 |
| Solyc09g075970.2.1 | Tomato | cytosol | 54.72 | 47.99 |
| CDY10103 | Canola | extracellular | 34.77 | 47.96 |
| CDY64658 | Canola | cytosol | 43.67 | 47.51 |
| CDY10638 | Canola | nucleus | 47.17 | 46.54 |
| GSMUA_Achr3P29630_001 | Banana | cytosol | 48.25 | 41.82 |
| GSMUA_Achr6P25200_001 | Banana | cytosol | 47.98 | 41.78 |
| GSMUA_Achr7P27040_001 | Banana | cytosol | 47.98 | 40.92 |
| Os03t0219100-01 | Rice | cytosol | 46.63 | 39.5 |
| EER95261 | Sorghum | cytosol | 45.82 | 38.29 |
| GSMUA_Achr5P08620_001 | Banana | nucleus | 47.71 | 38.15 |
| Zm00001d028231_P003 | Maize | cytosol | 45.28 | 37.17 |
| TraesCS4D01G242900.1 | Wheat | cytosol | 44.74 | 36.97 |
| Zm00001d048066_P001 | Maize | cytosol | 43.4 | 36.84 |
| TraesCS4A01G065900.1 | Wheat | cytosol | 45.01 | 36.38 |
| TraesCS4B01G243300.1 | Wheat | cytosol | 43.94 | 36.06 |
| CDY38239 | Canola | cytosol | 4.85 | 28.57 |
| HORVU4Hr1G067410.4 | Barley | plastid | 38.27 | 28.46 |
| CDX75583 | Canola | cytosol | 8.89 | 21.02 |
| CDX90694 | Canola | cytosol | 15.36 | 18.45 |
| CDY00428 | Canola | cytosol | 15.09 | 18.36 |
| CDY05023 | Canola | cytosol | 15.36 | 18.15 |
| CDY56380 | Canola | cytosol | 14.56 | 17.7 |
| CDY21345 | Canola | cytosol | 14.82 | 17.08 |
| CDX90047 | Canola | cytosol | 11.32 | 16.47 |
| CDY15164 | Canola | cytosol | 11.32 | 16.47 |
| CDX73146 | Canola | cytosol | 12.67 | 16.26 |
| CDY38020 | Canola | cytosol | 11.32 | 16.03 |
| CDY24776 | Canola | cytosol | 12.4 | 15.7 |
| CDX81674 | Canola | cytosol | 10.24 | 15.57 |
| CDY33738 | Canola | cytosol | 10.24 | 15.57 |
| CDY45292 | Canola | cytosol | 10.24 | 15.51 |
| CDY51766 | Canola | cytosol | 10.24 | 15.51 |
| CDY35466 | Canola | cytosol | 12.13 | 15.36 |
| CDY16746 | Canola | plastid | 10.24 | 14.96 |
| CDX87279 | Canola | plastid | 10.24 | 14.96 |
| CDY65854 | Canola | nucleus | 11.59 | 14.88 |
| CDY33739 | Canola | cytosol | 9.97 | 14.62 |
| CDX72592 | Canola | cytosol | 11.32 | 14.53 |
| CDY42697 | Canola | cytosol | 11.32 | 14.53 |
| CDY12289 | Canola | cytosol | 7.28 | 12.8 |
| CDX81673 | Canola | endoplasmic reticulum, golgi | 10.24 | 12.5 |
| CDY45413 | Canola | cytosol | 12.94 | 12.47 |
| CDY38240 | Canola | peroxisome | 4.85 | 12.41 |
| CDX81672 | Canola | cytosol | 9.7 | 9.38 |
Protein Annotations
| EnsemblPlants:CDY38325 | EnsemblPlantsGene:GSBRNA2T00065718001 | Gene3D:3.40.525.10 | GO:A0A078HIM1 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR036865 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF132 |
| ProteinID:CDY38325 | ProteinID:CDY38325.1 | SEG:seg | SUPFAM:SSF46938 | SUPFAM:SSF52087 | TMHMM:TMhelix |
| UniParc:UPI0004EED4AA | UniProt:A0A078HIM1 | MapMan:35.2 | : | : | : |
Description
BnaC05g30180DBnaC05g30180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HIM1]
Coordinates
chrLK032421:+:310860..312503
Molecular Weight (calculated)
42134.5 Da
IEP (calculated)
10.394
GRAVY (calculated)
-0.430
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKRDEKAEA VLRLLRKQTP LTLKQEKFCN RECVERFLKG KGDNVKKAAK QLTSCLSWRQ NFDIERMGAE EFSAELADGV AYIAGHDGES RPVIMFRFKH
101: DYQKLRSQKH ELFLYIYIYI YIYIYILANE LGKGDAEAGR AFIIDPPSFF SYIWKGVRPF VELSTVTMLI SSLDYDEQLD ISHVSSSSCL RSASLRFDPS
201: SIKSTAKIGS ASSRFAFTVT RNSMKPWYLS LTDTSPFHAA VDSTASKVSP LSVRSLSFAS PAGRGLRDPK PAACRKSLFP STPLPEKTKT VPHRKTPRPS
301: FFQSPAMFFR GEKNVGGGEK SSREAFVPYL KFYRRPYDET AYRSKLRGPR GFVSVVSSHR RCRHVSLSQR F
101: DYQKLRSQKH ELFLYIYIYI YIYIYILANE LGKGDAEAGR AFIIDPPSFF SYIWKGVRPF VELSTVTMLI SSLDYDEQLD ISHVSSSSCL RSASLRFDPS
201: SIKSTAKIGS ASSRFAFTVT RNSMKPWYLS LTDTSPFHAA VDSTASKVSP LSVRSLSFAS PAGRGLRDPK PAACRKSLFP STPLPEKTKT VPHRKTPRPS
301: FFQSPAMFFR GEKNVGGGEK SSREAFVPYL KFYRRPYDET AYRSKLRGPR GFVSVVSSHR RCRHVSLSQR F
001: MGKKDEKVEA VLRLVKKQSP LTFKQEKFCN RECVERFLKV KGDNVKKAAK QLSSCLSWRQ NFDIERLGAE EFSTELSDGV AYISGHDRES RPVIIFRFKH
101: DYQKLHTQKQ FTRLVAFTIE TAISSMSRNT EQSFVLLFDA SFFRSSSAFA NLLLATLKII ADNYPCRLYK AFIIDPPSFF SYLWKGVRPF VELSTATMIL
201: SSLDYDEPLD ITHVSSNPRS TSLRFDASSI KSTASIGSAS SRFAFTVSQN SLKPWYLSFT DTSPYNPAVS SSAAAPVSPL SARSLPFASP AVRGFKDAKP
301: AACRKSLFPS TPLPEKTKTV SYRKTPRPSF FQSPAMFFRR ENNVGGGGEK SREAFVPYLK FYRRPYDETA YRSKLRGPRG FLSVVSSHRR SRHVSLSQRF
101: DYQKLHTQKQ FTRLVAFTIE TAISSMSRNT EQSFVLLFDA SFFRSSSAFA NLLLATLKII ADNYPCRLYK AFIIDPPSFF SYLWKGVRPF VELSTATMIL
201: SSLDYDEPLD ITHVSSNPRS TSLRFDASSI KSTASIGSAS SRFAFTVSQN SLKPWYLSFT DTSPYNPAVS SSAAAPVSPL SARSLPFASP AVRGFKDAKP
301: AACRKSLFPS TPLPEKTKTV SYRKTPRPSF FQSPAMFFRR ENNVGGGGEK SREAFVPYLK FYRRPYDETA YRSKLRGPRG FLSVVSSHRR SRHVSLSQRF
Arabidopsis Description
Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:Q9LUV9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.