Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031370.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDY38240 | Canola | peroxisome | 40.68 | 90.34 |
| CDY38239 | Canola | cytosol | 17.39 | 88.89 |
| CDY56380 | Canola | cytosol | 80.12 | 84.59 |
| CDY00428 | Canola | cytosol | 79.5 | 83.93 |
| AT1G22180.4 | Thale cress | cytosol | 78.57 | 80.57 |
| CDX90694 | Canola | cytosol | 55.28 | 57.61 |
| KRH16691 | Soybean | cytosol | 59.32 | 57.53 |
| KRH18888 | Soybean | cytosol | 59.01 | 57.06 |
| CDY05023 | Canola | cytosol | 55.28 | 56.69 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 54.97 | 56.19 |
| KRH53100 | Soybean | cytosol | 46.89 | 55.11 |
| KRH62380 | Soybean | cytosol | 45.96 | 54.01 |
| VIT_18s0001g05080.t01 | Wine grape | nucleus | 59.63 | 53.19 |
| Solyc04g072810.2.1 | Tomato | cytosol | 53.73 | 53.07 |
| PGSC0003DMT400024527 | Potato | cytosol | 53.73 | 52.42 |
| CDY12289 | Canola | cytosol | 33.23 | 50.71 |
| GSMUA_Achr3P04420_001 | Banana | cytosol | 52.48 | 50.6 |
| KRH62383 | Soybean | cytosol | 51.24 | 48.1 |
| EES05517 | Sorghum | cytosol | 52.17 | 48.0 |
| Zm00001d052231_P003 | Maize | cytosol | 51.24 | 47.14 |
| CDX73146 | Canola | cytosol | 40.99 | 45.67 |
| Os02t0752000-01 | Rice | cytosol | 52.48 | 44.71 |
| CDY24776 | Canola | cytosol | 40.06 | 44.03 |
| CDY35466 | Canola | cytosol | 39.44 | 43.34 |
| CDY65854 | Canola | nucleus | 38.82 | 43.25 |
| TraesCS6D01G281700.1 | Wheat | nucleus | 52.48 | 43.0 |
| CDX72592 | Canola | cytosol | 38.2 | 42.56 |
| CDY42697 | Canola | cytosol | 38.2 | 42.56 |
| CDX75583 | Canola | cytosol | 20.5 | 42.04 |
| TraesCS6A01G302200.1 | Wheat | nucleus | 52.17 | 41.69 |
| HORVU6Hr1G075070.1 | Barley | nucleus | 51.86 | 41.44 |
| TraesCS6B01G331400.1 | Wheat | nucleus | 51.55 | 41.19 |
| CDY45413 | Canola | cytosol | 41.93 | 35.06 |
| CDY15164 | Canola | cytosol | 20.81 | 26.27 |
| CDX90047 | Canola | cytosol | 20.81 | 26.27 |
| CDY38020 | Canola | cytosol | 20.19 | 24.81 |
| CDY33738 | Canola | cytosol | 18.32 | 24.18 |
| CDX81674 | Canola | cytosol | 18.32 | 24.18 |
| CDY16746 | Canola | plastid | 18.32 | 23.23 |
| CDX87279 | Canola | plastid | 18.32 | 23.23 |
| CDY51766 | Canola | cytosol | 16.46 | 21.63 |
| CDY45292 | Canola | cytosol | 16.46 | 21.63 |
| CDY33739 | Canola | cytosol | 16.15 | 20.55 |
| CDX81673 | Canola | endoplasmic reticulum, golgi | 16.77 | 17.76 |
| CDY10026 | Canola | cytosol | 22.05 | 17.07 |
| CDY59787 | Canola | cytosol | 21.43 | 16.59 |
| CDY10638 | Canola | nucleus | 18.32 | 15.69 |
| CDY64658 | Canola | cytosol | 16.15 | 15.25 |
| CDY38325 | Canola | cytosol | 17.08 | 14.82 |
| CDX81672 | Canola | cytosol | 16.15 | 13.54 |
| CDY71148 | Canola | cytosol, mitochondrion, nucleus, plastid | 12.42 | 12.58 |
| CDY10103 | Canola | extracellular | 9.32 | 11.15 |
Protein Annotations
| EnsemblPlants:CDY21345 | EnsemblPlantsGene:GSBRNA2T00015698001 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom |
| InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF202 | PFAM:PF00650 |
| PFscan:PS50191 | ProteinID:CDY21345 | ProteinID:CDY21345.1 | SEG:seg | SMART:SM00516 | SMART:SM01100 |
| SUPFAM:SSF46938 | SUPFAM:SSF52087 | UniParc:UPI0002547529 | UniProt:A0A078G4F4 | MapMan:35.2 | : |
Description
BnaA09g30820DBnaA09g30820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G4F4]
Coordinates
chrLK032120:-:60661..63362
Molecular Weight (calculated)
37055.1 Da
IEP (calculated)
6.414
GRAVY (calculated)
-0.663
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MFPFGLSGVG GMTYDMGKCG RMNFQEDMSS DTKSSPPSES EKTLPPEEYL NKINEVRGLL GPLTKKSSEY CSDAAIARYL AARNGHVKKA TKMLKETLKW
101: RTQYKPEEIR WEEISREAET GKIYRANCTD KYGRPVLVMR PSCQNTKSPK GQIRFLVYCM ENAILNLPDH QDQMVWLIDF HGFNMSHISV KVSRETAHVL
201: QEHYPERLGL AVLYNPPKIF EPFWKMVKPF LDPKTRNKVE FVYSDDNVSK KILEDIFDME QLEVAFGGEN SDSSFNFEKY AERMREDDLK FFGNTTVSST
301: SALLTNSDSE VLDSEKKHLE DK
101: RTQYKPEEIR WEEISREAET GKIYRANCTD KYGRPVLVMR PSCQNTKSPK GQIRFLVYCM ENAILNLPDH QDQMVWLIDF HGFNMSHISV KVSRETAHVL
201: QEHYPERLGL AVLYNPPKIF EPFWKMVKPF LDPKTRNKVE FVYSDDNVSK KILEDIFDME QLEVAFGGEN SDSSFNFEKY AERMREDDLK FFGNTTVSST
301: SALLTNSDSE VLDSEKKHLE DK
001: MNSDSNKSSS NGFEKSLTPE EYLNKINEVR TLLGPLTEKS SEFCSDAAIT RYLAARNGHV KKATKMLKET LKWRAQYKPE EIRWEEIARE AETGKIYRAN
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT
Arabidopsis Description
F16L1.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LM14]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.