CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039949.1-P	Field mustard	cytosol	61.7	57.86
AT3G22410.1	Thale cress	cytosol	53.72	50.5
CDY38325	Canola	cytosol	46.54	47.17
CDY71148	Canola	cytosol, mitochondrion, nucleus, plastid	34.31	40.57
KRH35529	Soybean	cytosol	42.29	39.36
KRG91288	Soybean	cytosol	42.02	39.11
CDY10026	Canola	cytosol	41.22	37.26
Solyc09g075970.2.1	Tomato	cytosol	41.49	36.88
CDY59787	Canola	cytosol	40.69	36.78
PGSC0003DMT400077340	Potato	cytosol	40.43	35.93
GSMUA_Achr3P29630_001	Banana	cytosol	40.16	35.28
GSMUA_Achr6P25200_001	Banana	cytosol	39.63	34.98
GSMUA_Achr7P27040_001	Banana	cytosol	39.63	34.25
Os03t0219100-01	Rice	cytosol	39.36	33.79
EER95261	Sorghum	cytosol	38.56	32.66
GSMUA_Achr5P08620_001	Banana	nucleus	39.89	32.33
CDY64658	Canola	cytosol	28.72	31.67
TraesCS4D01G242900.1	Wheat	cytosol	37.77	31.63
Zm00001d028231_P003	Maize	cytosol	37.77	31.42
Zm00001d048066_P001	Maize	cytosol	36.17	31.12
TraesCS4B01G243300.1	Wheat	cytosol	37.23	30.97
TraesCS4A01G065900.1	Wheat	cytosol	37.77	30.94
CDY38239	Canola	cytosol	4.79	28.57
HORVU4Hr1G067410.4	Barley	plastid	31.65	23.85
CDX90047	Canola	cytosol	15.16	22.35
CDY15164	Canola	cytosol	15.16	22.35
CDY10103	Canola	extracellular	15.69	21.93
CDY00428	Canola	cytosol	16.76	20.66
CDY38020	Canola	cytosol	14.1	20.23
CDX90694	Canola	cytosol	16.49	20.06
CDY45292	Canola	cytosol	13.03	20.0
CDY51766	Canola	cytosol	13.03	20.0
CDY05023	Canola	cytosol	16.49	19.75
CDY56380	Canola	cytosol	15.96	19.67
CDX73146	Canola	cytosol	14.89	19.38
CDX75583	Canola	cytosol	7.98	19.11
CDY16746	Canola	plastid	12.5	18.5
CDX87279	Canola	plastid	12.5	18.5
CDY21345	Canola	cytosol	15.69	18.32
CDY33739	Canola	cytosol	12.23	18.18
CDY33738	Canola	cytosol	11.7	18.03
CDX81674	Canola	cytosol	11.7	18.03
CDX81673	Canola	endoplasmic reticulum, golgi	13.83	17.11
CDY65854	Canola	nucleus	13.03	16.95
CDY35466	Canola	cytosol	13.03	16.72
CDY24776	Canola	cytosol	13.03	16.72
CDY42697	Canola	cytosol	12.23	15.92
CDX72592	Canola	cytosol	12.23	15.92
CDY45413	Canola	cytosol	15.69	15.32
CDY12289	Canola	cytosol	7.98	14.22
CDY38240	Canola	peroxisome	5.05	13.1
CDX81672	Canola	cytosol	12.5	12.24

Protein Annotations

EnsemblPlants:CDY10638	EnsemblPlantsGene:GSBRNA2T00048380001	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom_sf
InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR10174	PANTHER:PTHR10174:SF132	PFAM:PF00650	PFscan:PS50191
ProteinID:CDY10638	ProteinID:CDY10638.1	SEG:seg	SMART:SM00516	SUPFAM:SSF46938	SUPFAM:SSF52087
UniParc:UPI0004EE772E	UniProt:A0A078FEX7	MapMan:35.2	:	:	:

Description

BnaA05g17240DBnaA05g17240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FEX7]

Coordinates

chrLK032005:-:228792..236614

Molecular Weight (calculated)

43389.2 Da

IEP (calculated)

8.652

GRAVY (calculated)

-0.281

Length

376 amino acids

Sequence
(BLAST)

001: MEFFCHSSYR VIEILECVIV DKKPVKSLIS DLAETVSITQ RHTTLSVSSL FIERDIQRFC SNKETCGTHT YLQSSSASSP SSPRTKKTIF LILYRIFCFV
101: HHQEMGKRDE KAEAVLRLLR KQTPLTLKQE KFCNRDCVER FLKGKGDNVK KAAKQLTSCL SWRQNFDIER IGAEEFSAEL ADGVAYIAGH DGESRPVIMF
201: RFKHDYQKLR SQKQFTRLVA FTMETAISSM SRNAEQSVVL LFDASFFRSS SAFANLLLAT LKMIADNYPC RLHKAFIIDP PSFFSYIWKG VRPFVELSTV
301: TMLISSLDYD EQLDISHVSS SSCLRSASLR FDPSSMRERE REREREREIL CLENEERDKI VKNNKIAKVY VIFSCE

Best Arabidopsis Sequence Match ( AT3G22410.1 )
(BLAST)

001: MGKKDEKVEA VLRLVKKQSP LTFKQEKFCN RECVERFLKV KGDNVKKAAK QLSSCLSWRQ NFDIERLGAE EFSTELSDGV AYISGHDRES RPVIIFRFKH
101: DYQKLHTQKQ FTRLVAFTIE TAISSMSRNT EQSFVLLFDA SFFRSSSAFA NLLLATLKII ADNYPCRLYK AFIIDPPSFF SYLWKGVRPF VELSTATMIL
201: SSLDYDEPLD ITHVSSNPRS TSLRFDASSI KSTASIGSAS SRFAFTVSQN SLKPWYLSFT DTSPYNPAVS SSAAAPVSPL SARSLPFASP AVRGFKDAKP
301: AACRKSLFPS TPLPEKTKTV SYRKTPRPSF FQSPAMFFRR ENNVGGGGEK SREAFVPYLK FYRRPYDETA YRSKLRGPRG FLSVVSSHRR SRHVSLSQRF

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:Q9LUV9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.