Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY33739 | Canola | cytosol | 56.77 | 86.17 |
| CDY45292 | Canola | cytosol | 53.91 | 84.49 |
| CDY51766 | Canola | cytosol | 53.91 | 84.49 |
| AT1G14820.3 | Thale cress | cytosol | 53.39 | 81.35 |
| CDY33738 | Canola | cytosol | 51.3 | 80.74 |
| CDX81674 | Canola | cytosol | 49.48 | 77.87 |
| CDX81673 | Canola | endoplasmic reticulum, golgi | 57.55 | 72.7 |
| Solyc01g005270.2.1 | Tomato | cytosol | 41.93 | 67.08 |
| Solyc01g005260.2.1 | Tomato | cytosol | 41.93 | 67.08 |
| PGSC0003DMT400058687 | Potato | cytosol | 40.89 | 65.42 |
| Solyc01g005280.2.1 | Tomato | cytosol | 40.1 | 64.17 |
| VIT_01s0011g05850.t01 | Wine grape | cytosol | 40.36 | 63.79 |
| PGSC0003DMT400058639 | Potato | cytosol | 33.59 | 63.55 |
| Solyc01g005290.2.1 | Tomato | cytosol | 32.29 | 62.63 |
| KRH70361 | Soybean | cytosol | 40.1 | 62.35 |
| PGSC0003DMT400058685 | Potato | cytosol | 29.43 | 56.22 |
| PGSC0003DMT400058682 | Potato | cytosol | 40.89 | 55.48 |
| CDY15164 | Canola | cytosol | 22.92 | 34.51 |
| CDX90047 | Canola | cytosol | 22.66 | 34.12 |
| CDY38020 | Canola | cytosol | 22.14 | 32.44 |
| CDY38239 | Canola | cytosol | 4.69 | 28.57 |
| CDY05023 | Canola | cytosol | 16.67 | 20.38 |
| CDX73146 | Canola | cytosol | 15.1 | 20.07 |
| CDX90694 | Canola | cytosol | 15.89 | 19.74 |
| CDY24776 | Canola | cytosol | 14.32 | 18.77 |
| CDY00428 | Canola | cytosol | 14.84 | 18.69 |
| CDY35466 | Canola | cytosol | 14.06 | 18.43 |
| CDY42697 | Canola | cytosol | 13.8 | 18.34 |
| CDY65854 | Canola | nucleus | 13.8 | 18.34 |
| CDX87279 | Canola | plastid | 11.98 | 18.11 |
| CDY16746 | Canola | plastid | 11.98 | 18.11 |
| CDX72592 | Canola | cytosol | 13.54 | 17.99 |
| CDY56380 | Canola | cytosol | 14.06 | 17.7 |
| CDX75583 | Canola | cytosol | 6.77 | 16.56 |
| CDY21345 | Canola | cytosol | 13.54 | 16.15 |
| CDY45413 | Canola | cytosol | 15.36 | 15.32 |
| CDY12289 | Canola | cytosol | 8.33 | 15.17 |
| CDY10638 | Canola | nucleus | 12.24 | 12.5 |
| CDY59787 | Canola | cytosol | 12.76 | 11.78 |
| CDY10026 | Canola | cytosol | 12.76 | 11.78 |
| CDY38240 | Canola | peroxisome | 4.43 | 11.72 |
| CDY64658 | Canola | cytosol | 8.85 | 9.97 |
| CDY38325 | Canola | cytosol | 9.38 | 9.7 |
| CDY71148 | Canola | cytosol, mitochondrion, nucleus, plastid | 7.29 | 8.81 |
| CDY10103 | Canola | extracellular | 4.43 | 6.32 |
Protein Annotations
| KEGG:00220+1.2.1.38 | Gene3D:1.10.8.20 | Gene3D:3.30.360.10 | Gene3D:3.40.525.10 | MapMan:4.1.2.2.2 | GO:A0A078CY03 |
| EnsemblPlants:CDX81672 | ProteinID:CDX81672 | ProteinID:CDX81672.1 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom_sf |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008652 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016620 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00136592001 | InterPro:IPR001251 | InterPro:IPR036865 |
| PFAM:PF00650 | PFAM:PF02774 | PFscan:PS50191 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF121 | MetaCyc:PWY-5154 |
| MetaCyc:PWY-7400 | SMART:SM00516 | SUPFAM:SSF46938 | SUPFAM:SSF52087 | SUPFAM:SSF55347 | InterPro:Semialdhyde_DH_dimer_dom |
| UniPathway:UPA00068 | UniParc:UPI0004EE6C7F | SEG:seg | : | : | : |
Description
BnaC08g39290D
Coordinates
chrLK031826:-:295519..298610
Molecular Weight (calculated)
43267.4 Da
IEP (calculated)
7.370
GRAVY (calculated)
-0.214
Length
384 amino acids
Sequence
(BLAST)
(BLAST)
001: MEESQELALT QLRKSVEKLS SSTEGYEVPT LMRFLVARSM NPDKAAKMFV DWQKWRASMV PPNGIPDSEV KDELEFKRIY LQGLTKSGQP LVICQVSKHF
101: PAKDPVTFKK FVVHVLDKTI ASGIKGKEVG DEKLVAVIDL SNITYKNLDA RGFITGFQFL QSYYPERLAK CYILHMPGFF LTVWRFICRF LEKATQEKIV
201: IVTEGEEERK FKEEIGLDSL PEEYGGRAKL TLIQDVLLPQ TSYKVTTVCL SSPPPNPLSL LPAATMATRK IWNDTEVKVT ETCIRVPLMR AHAESVNLQF
301: ENPLDENTAR ELLKKAPGVY IIDDRSSNTF PTPLDVSNKD DVAVGRIRRD VSQNGNFGLD IFVCGDQIRK GAALNAVQIA EMLL
101: PAKDPVTFKK FVVHVLDKTI ASGIKGKEVG DEKLVAVIDL SNITYKNLDA RGFITGFQFL QSYYPERLAK CYILHMPGFF LTVWRFICRF LEKATQEKIV
201: IVTEGEEERK FKEEIGLDSL PEEYGGRAKL TLIQDVLLPQ TSYKVTTVCL SSPPPNPLSL LPAATMATRK IWNDTEVKVT ETCIRVPLMR AHAESVNLQF
301: ENPLDENTAR ELLKKAPGVY IIDDRSSNTF PTPLDVSNKD DVAVGRIRRD VSQNGNFGLD IFVCGDQIRK GAALNAVQIA EMLL
001: MEESQELALT QLRKSVEKLS SSTEGYDKPT LMRFLVARSM DPVKAAKMFV DWQKWRASMV PPTGFIPESE VQDELEFRKV CLQGPTKSGH PLVLVITSKH
101: FASKDPANFK KFVVYALDKT IASGNNGKEV GGEKLVAVID LANITYKNLD ARGLITGFQF LQSYYPERLA KCYILHMPGF FVTVWKFVCR FLEKATQEKI
201: VIVTDGEEQR KFEEEIGADA LPEEYGGRAK LTAIQDVLLP QAAPVTLTNN NV
101: FASKDPANFK KFVVYALDKT IASGNNGKEV GGEKLVAVID LANITYKNLD ARGLITGFQF LQSYYPERLA KCYILHMPGF FVTVWKFVCR FLEKATQEKI
201: VIVTDGEEQR KFEEEIGADA LPEEYGGRAK LTAIQDVLLP QAAPVTLTNN NV
Arabidopsis Description
AT1G14820 protein [Source:UniProtKB/TrEMBL;Acc:B9DGS8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.