Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G75170.1 | Thale cress | cytosol | 90.31 | 88.18 |
| CDY45413 | Canola | cytosol | 98.62 | 74.03 |
| Solyc12g089130.1.1 | Tomato | cytosol | 58.13 | 72.1 |
| Solyc04g080290.2.1 | Tomato | cytosol | 70.24 | 70.73 |
| PGSC0003DMT400013200 | Potato | cytosol | 69.55 | 70.03 |
| KRH05807 | Soybean | cytosol | 67.82 | 66.89 |
| KRH15219 | Soybean | cytosol | 66.09 | 66.78 |
| GSMUA_AchrUn_... | Banana | cytosol | 64.01 | 64.91 |
| KRH51858 | Soybean | nucleus, plastid | 44.98 | 64.04 |
| GSMUA_Achr4P03190_001 | Banana | cytosol | 59.86 | 61.79 |
| KRH61179 | Soybean | cytosol | 38.06 | 60.77 |
| CDY24776 | Canola | cytosol | 61.25 | 60.41 |
| CDY35466 | Canola | cytosol | 60.21 | 59.39 |
| GSMUA_Achr8P26360_001 | Banana | cytosol | 60.21 | 58.59 |
| CDX72592 | Canola | cytosol | 58.13 | 58.13 |
| CDY42697 | Canola | cytosol | 58.13 | 58.13 |
| CDY65854 | Canola | nucleus | 57.09 | 57.09 |
| KXG37682 | Sorghum | cytosol | 56.4 | 55.63 |
| EER93541 | Sorghum | cytosol | 56.06 | 54.55 |
| TraesCS4A01G259700.1 | Wheat | cytosol | 52.94 | 52.4 |
| CDY38239 | Canola | cytosol | 11.42 | 52.38 |
| TraesCS4D01G055100.1 | Wheat | cytosol | 37.72 | 52.15 |
| TraesCS4D01G055200.1 | Wheat | cytosol | 52.6 | 52.05 |
| Os03t0724100-01 | Rice | cytosol | 53.63 | 51.84 |
| HORVU4Hr1G074380.1 | Barley | cytosol | 24.91 | 51.8 |
| TraesCS4B01G055000.1 | Wheat | cytosol | 52.25 | 51.71 |
| HORVU4Hr1G009210.2 | Barley | cytosol | 52.25 | 51.71 |
| TraesCS4D01G055400.1 | Wheat | cytosol | 51.56 | 51.03 |
| TraesCS4D01G055300.1 | Wheat | cytosol | 51.21 | 50.68 |
| HORVU4Hr1G009310.1 | Barley | cytosol | 51.21 | 50.68 |
| TraesCS4A01G259600.1 | Wheat | cytosol | 51.21 | 50.68 |
| TraesCS4B01G055100.1 | Wheat | cytosol | 49.48 | 50.53 |
| Zm00001d033836_P001 | Maize | nucleus | 51.56 | 50.51 |
| TraesCS4A01G259500.1 | Wheat | cytosol | 50.52 | 50.0 |
| HORVU4Hr1G009190.1 | Barley | cytosol | 50.17 | 49.66 |
| KXG37681 | Sorghum | cytosol | 52.6 | 49.19 |
| HORVU5Hr1G114590.3 | Barley | mitochondrion | 20.76 | 49.18 |
| TraesCS4B01G055200.1 | Wheat | cytosol | 49.48 | 48.97 |
| HORVU6Hr1G021650.1 | Barley | cytosol, mitochondrion, nucleus | 23.53 | 48.92 |
| HORVU4Hr1G005090.2 | Barley | cytosol | 21.8 | 48.46 |
| TraesCS7B01G089700.1 | Wheat | cytosol | 47.4 | 48.41 |
| CDX75583 | Canola | cytosol | 25.95 | 47.77 |
| CDY00428 | Canola | cytosol | 47.4 | 44.92 |
| HORVU3Hr1G080050.1 | Barley | cytosol, mitochondrion, plastid | 23.88 | 44.23 |
| HORVU5Hr1G020290.3 | Barley | plastid | 23.18 | 43.79 |
| CDY56380 | Canola | cytosol | 46.02 | 43.61 |
| Zm00001d033837_P001 | Maize | plastid | 42.91 | 41.61 |
| CDY21345 | Canola | cytosol | 45.67 | 40.99 |
| CDX90694 | Canola | cytosol | 42.56 | 39.81 |
| CDY05023 | Canola | cytosol | 42.91 | 39.49 |
| CDY38240 | Canola | peroxisome | 17.3 | 34.48 |
| CDY12289 | Canola | cytosol | 24.57 | 33.65 |
| CDY33738 | Canola | cytosol | 21.8 | 25.82 |
| CDX90047 | Canola | cytosol | 22.15 | 25.1 |
| CDX81674 | Canola | cytosol | 21.11 | 25.0 |
| CDY15164 | Canola | cytosol | 21.45 | 24.31 |
| CDY51766 | Canola | cytosol | 20.42 | 24.08 |
| CDY45292 | Canola | cytosol | 20.42 | 24.08 |
| CDY38020 | Canola | cytosol | 21.8 | 24.05 |
| CDX87279 | Canola | plastid | 20.42 | 23.23 |
| CDY16746 | Canola | plastid | 20.42 | 23.23 |
| CDY33739 | Canola | cytosol | 20.07 | 22.92 |
| CDX81673 | Canola | endoplasmic reticulum, golgi | 20.42 | 19.41 |
| CDX81672 | Canola | cytosol | 20.07 | 15.1 |
| CDY10638 | Canola | nucleus | 19.38 | 14.89 |
| CDY10026 | Canola | cytosol | 20.07 | 13.94 |
| CDY59787 | Canola | cytosol | 19.72 | 13.7 |
| CDY38325 | Canola | cytosol | 16.26 | 12.67 |
| CDY64658 | Canola | cytosol | 14.88 | 12.61 |
| CDY71148 | Canola | cytosol, mitochondrion, nucleus, plastid | 11.07 | 10.06 |
| CDY10103 | Canola | extracellular | 7.61 | 8.18 |
Protein Annotations
| EnsemblPlants:CDX73146 | EnsemblPlantsGene:GSBRNA2T00103624001 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom |
| InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF206 | PFAM:PF00650 |
| PFAM:PF03765 | PFscan:PS50191 | ProteinID:CDX73146 | ProteinID:CDX73146.1 | SMART:SM00516 | SMART:SM01100 |
| SUPFAM:SSF46938 | SUPFAM:SSF52087 | UniParc:UPI0004EC5F79 | MapMan:35.2 | : | : |
Description
BnaC06g35940D
Coordinates
chrLK031797:+:2303349..2305190
Molecular Weight (calculated)
33463.7 Da
IEP (calculated)
6.385
GRAVY (calculated)
-0.593
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MFRRKTTSQA EQENNEAALR EAKIKEVKTL IGELSGRSSL YCSDPCLKRY LEARNWNVGK AKKMLEETLK WRSTFKPEEI RWNEVSGEGE TGKVYKAGFH
101: DRSGRTVLIL RPGLQNTKSL ENQMKHLVYL IENAIMNLPE DQEQMSWLID FTDWSLSTSV PIKSARETIN ILQNHYPERL AVAFLYNPPR LFEAFWKIVK
201: YFIDAKTFIK VKFVYPKNPE SVELMSSFFD EENLPTEFGG KALLQYNHEE FSKQMNQDDA KTADFWGLVH SSSEFSGAEI APEPIQTNP
101: DRSGRTVLIL RPGLQNTKSL ENQMKHLVYL IENAIMNLPE DQEQMSWLID FTDWSLSTSV PIKSARETIN ILQNHYPERL AVAFLYNPPR LFEAFWKIVK
201: YFIDAKTFIK VKFVYPKNPE SVELMSSFFD EENLPTEFGG KALLQYNHEE FSKQMNQDDA KTADFWGLVH SSSEFSGAEI APEPIQTNP
001: MFRWKNSSQT EQEQKEAALR EAKMKELKTL IGQLSGRNSL YCSDACLKRY LEARNWNVGK AKKMLEETLK WRSSFKPEEI RWNEVSGEGE TGKVYKAGFH
101: DRHGRTVLIL RPGLQNTKSL ENQMKHLVYL IENAILNLPE DQEQMSWLID FTGWSMSTSV PIKSARETIN ILQNHYPERL AVAFLYNPPR LFEAFWKIVK
201: YFIDAKTFVK VKFVYPKNSE SVELMSTFFD EENLPTEFGG KALLQYNYEE FSKQMNQDDV KTANFWGLGH SNNNQLHASN GFSGAEIAPE PIQNHP
101: DRHGRTVLIL RPGLQNTKSL ENQMKHLVYL IENAILNLPE DQEQMSWLID FTGWSMSTSV PIKSARETIN ILQNHYPERL AVAFLYNPPR LFEAFWKIVK
201: YFIDAKTFVK VKFVYPKNSE SVELMSTFFD EENLPTEFGG KALLQYNYEE FSKQMNQDDV KTANFWGLGH SNNNQLHASN GFSGAEIAPE PIQNHP
Arabidopsis Description
Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:Q9FRK8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.