Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G055300.1 | Wheat | cytosol | 93.99 | 91.1 |
| TraesCS4A01G259600.1 | Wheat | cytosol | 93.64 | 90.75 |
| HORVU4Hr1G009190.1 | Barley | cytosol | 89.4 | 86.64 |
| TraesCS7B01G089700.1 | Wheat | cytosol | 84.1 | 84.1 |
| TraesCS4B01G055000.1 | Wheat | cytosol | 84.81 | 82.19 |
| TraesCS4B01G055200.1 | Wheat | cytosol | 84.1 | 81.51 |
| Os03t0724100-01 | Rice | cytosol | 76.68 | 72.58 |
| EER93541 | Sorghum | cytosol | 75.27 | 71.72 |
| KXG37682 | Sorghum | cytosol | 69.61 | 67.24 |
| Zm00001d033836_P001 | Maize | nucleus | 69.26 | 66.44 |
| KXG37681 | Sorghum | cytosol | 67.84 | 62.14 |
| Zm00001d033837_P001 | Maize | plastid | 61.13 | 58.05 |
| GSMUA_Achr4P03190_001 | Banana | cytosol | 54.42 | 55.0 |
| GSMUA_AchrUn_... | Banana | cytosol | 54.42 | 54.04 |
| VIT_04s0023g01720.t01 | Wine grape | cytosol, mitochondrion | 54.06 | 52.76 |
| KRH15219 | Soybean | cytosol | 51.94 | 51.4 |
| PGSC0003DMT400038571 | Potato | cytosol | 47.7 | 50.37 |
| KRH05807 | Soybean | cytosol | 51.59 | 49.83 |
| CDX73146 | Canola | cytosol | 50.53 | 49.48 |
| KRH51858 | Soybean | nucleus, plastid | 35.34 | 49.26 |
| AT1G75170.1 | Thale cress | cytosol | 51.24 | 48.99 |
| KRH61179 | Soybean | cytosol | 31.1 | 48.62 |
| Solyc02g085300.2.1 | Tomato | cytosol | 37.1 | 48.61 |
| GSMUA_Achr8P26360_001 | Banana | cytosol | 50.88 | 48.48 |
| KRH08288 | Soybean | cytosol | 50.53 | 48.31 |
| PGSC0003DMT400013200 | Potato | cytosol | 48.41 | 47.74 |
| Solyc12g089130.1.1 | Tomato | cytosol | 39.22 | 47.64 |
| KRH69927 | Soybean | cytosol | 49.82 | 47.64 |
| Bra010566.1-P | Field mustard | cytosol | 48.76 | 47.1 |
| CDY24776 | Canola | cytosol | 48.76 | 47.1 |
| Solyc04g080290.2.1 | Tomato | cytosol | 47.7 | 47.04 |
| VIT_18s0001g12420.t01 | Wine grape | cytosol | 52.3 | 46.98 |
| Bra011696.1-P | Field mustard | nucleus | 47.7 | 46.55 |
| CDY35466 | Canola | cytosol | 47.7 | 46.08 |
| CDY65854 | Canola | nucleus | 46.64 | 45.67 |
| CDY42697 | Canola | cytosol | 45.94 | 44.98 |
| Bra017768.1-P | Field mustard | cytosol | 45.58 | 44.64 |
| CDX72592 | Canola | cytosol | 45.58 | 44.64 |
| AT4G36640.3 | Thale cress | cytosol | 45.94 | 44.22 |
| CDX75583 | Canola | cytosol | 21.91 | 39.49 |
| Bra015863.1-P | Field mustard | cytosol | 50.53 | 37.24 |
| CDY45413 | Canola | cytosol | 50.53 | 37.14 |
| TraesCS3B01G211200.1 | Wheat | nucleus | 38.16 | 35.76 |
| TraesCS3B01G500500.1 | Wheat | cytosol, nucleus, plastid | 31.1 | 31.54 |
| TraesCS3B01G502500.1 | Wheat | cytosol, nucleus, plastid | 30.74 | 31.18 |
| TraesCS6B01G331400.1 | Wheat | nucleus | 38.52 | 27.05 |
| TraesCS5B01G552300.1 | Wheat | cytosol | 22.97 | 26.86 |
| TraesCS5B01G552100.1 | Wheat | cytosol | 21.55 | 25.21 |
| TraesCS3B01G475000.1 | Wheat | cytosol | 21.91 | 25.2 |
| TraesCS5B01G551900.1 | Wheat | cytosol | 22.61 | 25.1 |
| TraesCS5B01G552400.1 | Wheat | cytosol | 21.55 | 24.9 |
| TraesCS5B01G451100.1 | Wheat | cytosol | 21.91 | 24.8 |
| TraesCS3B01G475100.1 | Wheat | cytosol | 20.85 | 24.69 |
| TraesCS5B01G552200.1 | Wheat | cytosol | 21.91 | 24.31 |
| TraesCS7B01G361800.2 | Wheat | mitochondrion, plastid | 17.67 | 16.34 |
| TraesCS4B01G243300.1 | Wheat | cytosol | 22.61 | 14.16 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G055100.1 | EnsemblPlantsGene:TraesCS4B01G055100 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom |
| InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF206 | PFAM:PF00650 |
| PFAM:PF03765 | PFscan:PS50191 | SMART:SM00516 | SMART:SM01100 | SUPFAM:SSF46938 | SUPFAM:SSF52087 |
| TIGR:cd00170 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr4B:+:43756861..43759052
Molecular Weight (calculated)
32558.8 Da
IEP (calculated)
8.426
GRAVY (calculated)
-0.551
Length
283 amino acids
Sequence
(BLAST)
(BLAST)
001: MFRKKQASHF DSDDAEQRQA KIKELKAALG PFSARGKKYC DEACLVRYLE ARNWNVDKSR KMLEESIKWR AAKRPEDIRW PDVSVEAETG KMYRATFTDR
101: EGRTNTSSHE GQLQYLVYTL ENAVLSLPEG HDKMVWLIDF TGWTLAHATP FKTARDCMNV LQNHYPERLS IAFLFNPPKV FEASFKVLKV LVDPKSAQKL
201: NFVYKENEES MKTMYSHIDP EVLPVEFGGK NNVVYNHEDY SKLMIKDDIK RASFWAADVS HVVNVDSVPE VKPQSSLIVA KAS
101: EGRTNTSSHE GQLQYLVYTL ENAVLSLPEG HDKMVWLIDF TGWTLAHATP FKTARDCMNV LQNHYPERLS IAFLFNPPKV FEASFKVLKV LVDPKSAQKL
201: NFVYKENEES MKTMYSHIDP EVLPVEFGGK NNVVYNHEDY SKLMIKDDIK RASFWAADVS HVVNVDSVPE VKPQSSLIVA KAS
001: MNSDSNKSSS NGFEKSLTPE EYLNKINEVR TLLGPLTEKS SEFCSDAAIT RYLAARNGHV KKATKMLKET LKWRAQYKPE EIRWEEIARE AETGKIYRAN
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT
Arabidopsis Description
F16L1.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LM14]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.