Factsheet for GSMUA_AchrUn_randomP24020_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P26360_001	Banana	cytosol	77.89	74.75
GSMUA_Achr4P03190_001	Banana	cytosol	70.18	71.43
Solyc12g089130.1.1	Tomato	cytosol	54.74	66.95
KRH05807	Soybean	cytosol	67.37	65.53
VIT_04s0023g01720.t01	Wine grape	cytosol, mitochondrion	66.67	65.52
PGSC0003DMT400013200	Potato	cytosol	65.96	65.51
Solyc04g080290.2.1	Tomato	cytosol	65.96	65.51
KRH15219	Soybean	cytosol	65.61	65.38
Solyc02g085300.2.1	Tomato	cytosol	49.12	64.81
CDX73146	Canola	cytosol	64.91	64.01
KRH51858	Soybean	nucleus, plastid	45.26	63.55
PGSC0003DMT400038571	Potato	cytosol	59.65	63.43
AT1G75170.1	Thale cress	cytosol	64.91	62.5
KXG37682	Sorghum	cytosol	62.81	61.09
KRH61179	Soybean	cytosol	38.6	60.77
Bra010566.1-P	Field mustard	cytosol	62.11	60.41
CDY24776	Canola	cytosol	62.11	60.41
VIT_18s0001g12420.t01	Wine grape	cytosol	66.67	60.32
Os03t0724100-01	Rice	cytosol	62.81	59.87
TraesCS4D01G055100.1	Wheat	cytosol	43.86	59.81
KRH69927	Soybean	cytosol	61.75	59.46
CDY35466	Canola	cytosol	61.05	59.39
KRH08288	Soybean	cytosol	61.4	59.12
Bra011696.1-P	Field mustard	nucleus	60.0	58.97
CDY65854	Canola	nucleus	59.3	58.48
EER93541	Sorghum	cytosol	60.7	58.25
TraesCS4D01G055200.1	Wheat	cytosol	59.65	58.22
TraesCS4B01G055000.1	Wheat	cytosol	59.65	58.22
TraesCS4A01G259700.1	Wheat	cytosol	59.65	58.22
CDY42697	Canola	cytosol	58.95	58.13
Bra017768.1-P	Field mustard	cytosol	58.6	57.79
CDX72592	Canola	cytosol	58.6	57.79
HORVU4Hr1G009210.2	Barley	cytosol	58.95	57.53
AT4G36640.3	Thale cress	cytosol	58.6	56.8
TraesCS4A01G259600.1	Wheat	cytosol	57.54	56.16
Zm00001d033836_P001	Maize	nucleus	57.89	55.93
TraesCS4A01G259500.1	Wheat	cytosol	57.19	55.82
TraesCS4D01G055300.1	Wheat	cytosol	57.19	55.82
HORVU4Hr1G074380.1	Barley	cytosol	27.02	55.4
TraesCS4D01G055400.1	Wheat	cytosol	56.49	55.14
TraesCS4B01G055200.1	Wheat	cytosol	56.14	54.79
HORVU4Hr1G009310.1	Barley	cytosol	55.79	54.45
TraesCS4B01G055100.1	Wheat	cytosol	54.04	54.42
HORVU4Hr1G009190.1	Barley	cytosol	55.44	54.11
TraesCS7B01G089700.1	Wheat	cytosol	53.68	54.06
HORVU4Hr1G005090.2	Barley	cytosol	24.56	53.85
KXG37681	Sorghum	cytosol	57.89	53.4
HORVU6Hr1G021650.1	Barley	cytosol, mitochondrion, nucleus	25.96	53.24
HORVU5Hr1G114590.3	Barley	mitochondrion	22.46	52.46
CDX75583	Canola	cytosol	28.42	51.59
HORVU3Hr1G080050.1	Barley	cytosol, mitochondrion, plastid	26.67	48.72
Bra015863.1-P	Field mustard	cytosol	65.26	48.44
CDY45413	Canola	cytosol	65.26	48.31
HORVU5Hr1G020290.3	Barley	plastid	25.61	47.71
Zm00001d033837_P001	Maize	plastid	49.47	47.32
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	45.26	40.95
GSMUA_Achr8P01630_001	Banana	cytosol	49.47	40.52
GSMUA_Achr3P04420_001	Banana	cytosol	45.61	38.92
GSMUA_Achr10P...	Banana	nucleus	47.72	35.7
GSMUA_Achr9P17070_001	Banana	cytosol	47.72	32.85
GSMUA_Achr11P...	Banana	cytosol	26.67	30.89
GSMUA_Achr8P00480_001	Banana	cytosol	22.46	28.57
GSMUA_Achr4P15920_001	Banana	cytosol	25.26	27.38
GSMUA_Achr3P14480_001	Banana	mitochondrion	18.95	20.61
GSMUA_Achr3P29630_001	Banana	cytosol	23.51	15.65
GSMUA_Achr7P27040_001	Banana	cytosol	23.16	15.17
GSMUA_Achr6P25200_001	Banana	cytosol	21.75	14.55
GSMUA_Achr5P08620_001	Banana	nucleus	22.81	14.01

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP24020_001	EnsemblPlants:GSMUA_AchrUn_randomT24020_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG24020_001	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR10174	PANTHER:PTHR10174:SF206
PFAM:PF00650	PFAM:PF03765	PFscan:PS50191	PRINTS:PR00180	SMART:SM00516	SMART:SM01100
SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI00029565C2	UniProt:M0UBW0	MapMan:35.2	:

Description

SEC14 cytosolic factor family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG24020_001]

Coordinates

chrchrUn_random:+:118867368..118872030

Molecular Weight (calculated)

33146.3 Da

IEP (calculated)

7.862

GRAVY (calculated)

-0.681

Length

285 amino acids

Sequence
(BLAST)

001: MFRRKHSSND DQDHAAPQEE KVKELRAAIG PLSGHSLMFS DDACLRRYLV ARNWNIDKSK KMLQETLKWR ATYKPEEIRW HEVAVEGETG KVYRADFQDR
101: EGRSVLVLRP GKQNTSSHDN QLRHLVYLLE NAIINLPDGQ EQMIWLIDFT GWSLSNSVPI KTARETANIL QSHYPERLAA AFLYNPPRIF ESFWKIVKYF
201: LDPKTFQKVK FVYPKNEESM GVMHKNFDPE ILPEEFGGKS KVQYDHDEFS KLMSKDDVKT ASFWKPDEKT TLVAPEPAHF VAQAS

Best Arabidopsis Sequence Match ( AT1G75170.1 )
(BLAST)

001: MFRWKNSSQT EQEQKEAALR EAKMKELKTL IGQLSGRNSL YCSDACLKRY LEARNWNVGK AKKMLEETLK WRSSFKPEEI RWNEVSGEGE TGKVYKAGFH
101: DRHGRTVLIL RPGLQNTKSL ENQMKHLVYL IENAILNLPE DQEQMSWLID FTGWSMSTSV PIKSARETIN ILQNHYPERL AVAFLYNPPR LFEAFWKIVK
201: YFIDAKTFVK VKFVYPKNSE SVELMSTFFD EENLPTEFGG KALLQYNYEE FSKQMNQDDV KTANFWGLGH SNNNQLHASN GFSGAEIAPE PIQNHP

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:Q9FRK8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.