Factsheet for GSMUA_Achr8P00480_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr1P24290_001
GSMUA_Achr3P00280_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G01630.1	GSMUA_Achr1P24290_001	AT3G54850.1	21798944
AT1G01630.1	GSMUA_Achr3P00280_001	AT3G54850.1	21798944
AT1G01630.1	GSMUA_AchrUn_...	AT4G32190.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	69.2	63.01
Bra032645.1-P	Field mustard	cytosol	63.84	61.9
GSMUA_Achr4P15920_001	Banana	cytosol	70.98	60.46
KRH41051	Soybean	cytosol	65.18	58.87
VIT_01s0150g00170.t01	Wine grape	cytosol	62.5	56.91
Bra033247.1-P	Field mustard	cytosol	64.73	56.86
CDX90047	Canola	cytosol	64.73	56.86
AT1G01630.1	Thale cress	cytosol	64.73	56.86
CDY15164	Canola	cytosol	64.29	56.47
KRH54081	Soybean	cytosol	65.18	55.09
KRH63881	Soybean	cytosol	64.29	54.55
CDY38020	Canola	cytosol	63.39	54.2
VIT_17s0000g00130.t01	Wine grape	cytosol	61.61	53.91
PGSC0003DMT400036745	Potato	cytosol	61.61	50.92
Solyc03g118150.2.1	Tomato	cytosol	61.16	50.55
KRH59732	Soybean	endoplasmic reticulum, golgi	62.5	48.95
PGSC0003DMT400065724	Potato	cytosol	60.71	44.01
Solyc06g068800.2.1	Tomato	cytosol	60.27	43.69
GSMUA_AchrUn_...	Banana	cytosol	28.57	22.46
GSMUA_Achr4P03190_001	Banana	cytosol	27.23	21.79
GSMUA_Achr3P14480_001	Banana	mitochondrion	22.77	19.47
GSMUA_Achr8P26360_001	Banana	cytosol	25.0	18.86
GSMUA_Achr3P04420_001	Banana	cytosol	25.45	17.07
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	23.66	16.83
GSMUA_Achr8P01630_001	Banana	cytosol	25.0	16.09
GSMUA_Achr10P...	Banana	nucleus	23.66	13.91
GSMUA_Achr9P17070_001	Banana	cytosol	25.0	13.53
GSMUA_Achr3P29630_001	Banana	cytosol	25.45	13.32
GSMUA_Achr6P25200_001	Banana	cytosol	23.66	12.44
GSMUA_Achr7P27040_001	Banana	cytosol	22.77	11.72
GSMUA_Achr5P08620_001	Banana	nucleus	21.88	10.56

Protein Annotations

EnsemblPlants:GSMUA_Achr8P00480_001	EnsemblPlants:GSMUA_Achr8T00480_001	EnsemblPlantsGene:GSMUA_Achr8G00480_001	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR10174	PANTHER:PTHR10174:SF198
PFAM:PF00650	PFscan:PS50191	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087
UniParc:UPI00029554FE	UniProt:M0TLF0	MapMan:35.1	:	:	:

Description

Putative Random slug protein 5 [Source:GMGC_GENE;Acc:GSMUA_Achr8G00480_001]

Coordinates

chr8:+:385532..387845

Molecular Weight (calculated)

25990.7 Da

IEP (calculated)

9.641

GRAVY (calculated)

-0.324

Length

224 amino acids

Sequence
(BLAST)

001: MRAFVERRDP DAKEVDNLTL RRFLRARDLD IEKASAMFLK YLKWKKTAVP NGFVSETDIQ NELAQTKVFM QGRDKAGRPI GVVFGAKHFY STREMDEFKR
101: FVVYVLDKLC ASMPGGQEKF VGIVDLQGWG YSNCDIRGYI AALDIMQNYY PERLGKAYMV HVPYLFMKAW KIIYPFIDNN TRKKIVFVEN KNLKATLMKD
201: IEESQIPQTY GGELPLIPIE KSTM

Best Arabidopsis Sequence Match ( AT1G01630.1 )
(BLAST)

001: MENKETKQEP AAAAEQKTVP LIEDEIERSK VGIMRALCDR QDPETKEVDD LMIRRFLRAR DLDIEKASTM FLNYLTWKRS MLPKGHIPEA EIANDLSHNK
101: MCMQGHDKMG RPIAVAIGNR HNPSKGNPDE FKRFVVYTLE KICARMPRGQ EKFVAIGDLQ GWGYSNCDIR GYLAALSTLQ DCYPERLGKL YIVHAPYIFM
201: TAWKVIYPFI DANTKKKIVF VENKKLTPTL LEDIDESQLP DIYGGKLPLV PIQET

Arabidopsis Description

Polyphosphoinositide binding protein, putative [Source:UniProtKB/TrEMBL;Acc:Q9LQ96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.