CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX68825
CDX73439
CDX75227
CDX77598
CDX78273
CDX81487
CDX81488
CDX81489
CDX96050
CDX98195
CDY01879
CDY04200
CDY07403
CDY11716
CDY61790
CDY61791
CDY62667
CDY70352

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G01630.1	CDX96050	AT1G68060.1	21798944
AT1G01630.1	CDY01879	AT1G68060.1	21798944
AT1G01630.1	CDY04200	AT1G68060.1	21798944
AT1G01630.1	CDY07403	AT1G68060.1	21798944
AT1G01630.1	CDX77598	AT2G25650.1	21798944
AT1G01630.1	CDX98195	AT2G25650.1	21798944
AT1G01630.1	CDY11716	AT2G25650.1	21798944
AT1G01630.1	CDY62667	AT2G25650.1	21798944
AT1G01630.1	CDY70352	AT2G25650.1	21798944
AT1G01630.1	CDX73439	AT3G54850.1	21798944
AT1G01630.1	CDX78273	AT3G54850.1	21798944
AT1G01630.1	CDX68825	AT4G32190.1	21798944
AT1G01630.1	CDX75227	AT4G32190.1	21798944
AT1G01630.1	CDX81487	AT4G32190.1	21798944
AT1G01630.1	CDX81488	AT4G32190.1	21798944
AT1G01630.1	CDX81489	AT4G32190.1	21798944
AT1G01630.1	CDY61790	AT4G32190.1	21798944
AT1G01630.1	CDY61791	AT4G32190.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90047	Canola	cytosol	98.04	98.04
AT1G01630.1	Thale cress	cytosol	87.84	87.84
CDY38020	Canola	cytosol	89.41	87.02
VIT_01s0150g00170.t01	Wine grape	cytosol	63.92	66.26
GSMUA_Achr8P00480_001	Banana	cytosol	56.47	64.29
GSMUA_Achr11P...	Banana	cytosol	57.65	59.76
GSMUA_Achr4P15920_001	Banana	cytosol	58.43	56.65
EES02004	Sorghum	cytosol	49.8	51.63
Zm00001d042274_P001	Maize	cytosol	50.59	51.39
TraesCS4A01G333500.1	Wheat	cytosol	47.06	51.06
TraesCS5D01G538500.1	Wheat	cytosol	48.63	50.61
TraesCS5B01G552100.1	Wheat	cytosol	47.84	50.41
EER90511	Sorghum	cytosol	49.41	50.4
TraesCS5D01G538300.1	Wheat	cytosol	49.41	49.41
TraesCS5B01G551900.1	Wheat	cytosol	49.02	49.02
TraesCS5B01G552300.1	Wheat	cytosol	46.27	48.76
HORVU5Hr1G121940.5	Barley	cytosol	47.45	48.59
HORVU5Hr1G122080.1	Barley	cytosol	47.06	48.58
TraesCS5B01G552400.1	Wheat	cytosol	46.67	48.57
TraesCS3B01G475000.1	Wheat	cytosol	46.67	48.37
EES02002	Sorghum	cytosol	48.24	48.24
TraesCS3A01G440900.1	Wheat	cytosol	46.27	47.97
TraesCS5D01G538600.1	Wheat	cytosol	45.49	47.93
TraesCS4A01G333800.1	Wheat	cytosol	47.84	47.84
Os03t0850700-01	Rice	cytosol	48.63	47.51
TraesCS3D01G433700.1	Wheat	cytosol	46.27	47.39
TraesCS3D01G433800.1	Wheat	cytosol	44.31	47.08
Os01t0926800-01	Rice	cytosol, mitochondrion	45.49	46.96
TraesCS3B01G475100.1	Wheat	cytosol	43.53	46.44
TraesCS3A01G441000.1	Wheat	cytosol	44.31	46.31
TraesCS3A01G441100.2	Wheat	cytosol	43.53	46.25
Zm00001d042275_P001	Maize	cytosol	45.49	46.22
Zm00001d012847_P001	Maize	cytosol	49.8	46.01
TraesCS5B01G451100.1	Wheat	cytosol	45.1	46.0
TraesCS5B01G552200.1	Wheat	cytosol	45.1	45.1
TraesCS5D01G538700.1	Wheat	cytosol	47.06	37.97
CDX81674	Canola	cytosol	35.69	37.3
CDY33738	Canola	cytosol	35.29	36.89
HORVU5Hr1G121860.2	Barley	plastid	48.63	36.69
CDY33739	Canola	cytosol	36.08	36.36
HORVU3Hr1G096280.6	Barley	plastid	43.53	36.04
CDY51766	Canola	cytosol	34.12	35.51
CDY45292	Canola	cytosol	34.12	35.51
HORVU3Hr1G096290.4	Barley	plastid	46.27	33.52
CDX81673	Canola	endoplasmic reticulum, golgi	36.08	30.26
Zm00001d009968_P001	Maize	cytosol	31.37	25.64
Zm00001d034765_P001	Maize	cytosol	28.24	25.26
CDY38239	Canola	cytosol	5.88	23.81
CDX81672	Canola	cytosol	34.51	22.92
CDY00428	Canola	cytosol	27.06	22.62
CDY56380	Canola	cytosol	26.67	22.3
CDY24776	Canola	cytosol	24.71	21.5
CDY35466	Canola	cytosol	24.71	21.5
CDY65854	Canola	nucleus	24.31	21.45
CDX73146	Canola	cytosol	24.31	21.45
CDY21345	Canola	cytosol	26.27	20.81
CDY05023	Canola	cytosol	25.49	20.7
CDX87279	Canola	plastid	20.39	20.47
CDY16746	Canola	plastid	20.39	20.47
CDX72592	Canola	cytosol	23.14	20.42
CDX90694	Canola	cytosol	24.71	20.39
CDY42697	Canola	cytosol	22.75	20.07
CDX75583	Canola	cytosol	11.37	18.47
CDY12289	Canola	cytosol	14.51	17.54
CDY38240	Canola	peroxisome	9.41	16.55
CDY45413	Canola	cytosol	24.31	16.1
CDY10638	Canola	nucleus	22.35	15.16
CDY10026	Canola	cytosol	23.92	14.66
CDY59787	Canola	cytosol	23.53	14.42
CDY64658	Canola	cytosol	16.08	12.02
CDY38325	Canola	cytosol	16.47	11.32
CDY71148	Canola	cytosol, mitochondrion, nucleus, plastid	12.16	9.75
CDY10103	Canola	extracellular	8.63	8.18

Protein Annotations

EnsemblPlants:CDY15164	EnsemblPlantsGene:GSBRNA2T00085341001	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom
InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR10174	PANTHER:PTHR10174:SF198	PFAM:PF00650
PFscan:PS50191	ProteinID:CDY15164	ProteinID:CDY15164.1	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938
SUPFAM:SSF52087	UniParc:UPI0004EE9123	UniProt:A0A078FQM3	MapMan:35.1	:	:

Description

BnaC05g00430DBnaC05g00430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FQM3]

Coordinates

chrLK032052:-:202424..204117

Molecular Weight (calculated)

29174.3 Da

IEP (calculated)

7.892

GRAVY (calculated)

-0.475

Length

255 amino acids

Sequence
(BLAST)

001: MEKKETKQHV VAEAEQGNGT LIEDEIERSK VGIMRALCDR QDPSTKEVDD LMIRRFLRAR DMDIEKASTL FLKYLAWKKS VLPKGHIPES EIANDLSHNK
101: VCMQGHDKMG RPIVVSFGNR HNPSKGNPDE FKRFVVYTLE KICARMPRGE EKFTAIGDLQ GWGYSNCDIR GYLAALSTLQ DCYPERLGKL YIVHAPYIFM
201: TAWKVVYPFI DTNTKKKIVF VENKKLTATL LEDIDETQLP DIYGGKMPLT PIQDS

Best Arabidopsis Sequence Match ( AT1G01630.1 )
(BLAST)

001: MENKETKQEP AAAAEQKTVP LIEDEIERSK VGIMRALCDR QDPETKEVDD LMIRRFLRAR DLDIEKASTM FLNYLTWKRS MLPKGHIPEA EIANDLSHNK
101: MCMQGHDKMG RPIAVAIGNR HNPSKGNPDE FKRFVVYTLE KICARMPRGQ EKFVAIGDLQ GWGYSNCDIR GYLAALSTLQ DCYPERLGKL YIVHAPYIFM
201: TAWKVIYPFI DANTKKKIVF VENKKLTPTL LEDIDESQLP DIYGGKLPLV PIQET

Arabidopsis Description

Polyphosphoinositide binding protein, putative [Source:UniProtKB/TrEMBL;Acc:Q9LQ96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.