Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY62667 | Canola | nucleus | 85.37 | 41.67 |
| CDY70352 | Canola | nucleus | 88.62 | 40.22 |
| CDY11716 | Canola | nucleus | 86.99 | 37.15 |
| CDX98195 | Canola | nucleus | 86.99 | 34.74 |
| CDX98194 | Canola | cytosol | 30.08 | 24.83 |
| AT4G00270.1 | Thale cress | nucleus | 54.47 | 22.19 |
| CDY38562 | Canola | nucleus | 48.78 | 19.87 |
| CDY26991 | Canola | nucleus | 47.15 | 19.27 |
| CDY70351 | Canola | cytosol | 23.58 | 18.12 |
| AT2G25650.1 | Thale cress | nucleus | 54.47 | 17.36 |
| CDY11715 | Canola | cytosol | 21.14 | 16.35 |
| CDY72668 | Canola | cytosol, nucleus | 30.89 | 13.43 |
| CDY43727 | Canola | cytosol | 31.71 | 12.38 |
Protein Annotations
| EnsemblPlants:CDX77598 | EnsemblPlantsGene:GSBRNA2T00128520001 | PANTHER:PTHR31662 | PANTHER:PTHR31662:SF1 | ProteinID:CDX77598 | ProteinID:CDX77598.1 |
| UniParc:UPI0004EF0C13 | MapMan:35.1 | : | : | : | : |
Description
BnaA07g07360D
Coordinates
chrLK031811:+:2191151..2192067
Molecular Weight (calculated)
13913.2 Da
IEP (calculated)
4.708
GRAVY (calculated)
-0.708
Length
123 amino acids
Sequence
(BLAST)
(BLAST)
001: MHKGNSSQSE AFLLSKSIWG LLNESHQSAE EMANHEASNN EVTDADFEGN DESSWAVRDA FETMVSKGLS DYQKKLQLEK LMNLGSAKRK ELSDEWNELC
101: AEEVKLNIKR LKFSAMLAEA AKW
101: AEEVKLNIKR LKFSAMLAEA AKW
001: MATPTELGFS SPGGGGDDSD DNPPQKRTSK RTASETATEE ETKKKKKKKT KHNTKMASPP SNRIWNEEDE LSILKGLVDF RAKTGLESKI DWDAFYCYVK
101: GSIHVKVSKC QLMSKTRKLK KKFLDQMEKI DQGNDPHFTR SSETEAFGYS MMIWRKIDAE YTNGVMDKAH QSESGEEVFE EDEEVALIDK GAAKSGKSPH
201: EAVVVVDKIT TKKNGTAGKE SDDDDDDVLC AVRDAFETTM MSQGLSDYQK KLQLEKLMNL GTGKRRELSN EWKALCVEEL KLNINKLRFS AKLAEAANDG
301: K
101: GSIHVKVSKC QLMSKTRKLK KKFLDQMEKI DQGNDPHFTR SSETEAFGYS MMIWRKIDAE YTNGVMDKAH QSESGEEVFE EDEEVALIDK GAAKSGKSPH
201: EAVVVVDKIT TKKNGTAGKE SDDDDDDVLC AVRDAFETTM MSQGLSDYQK KLQLEKLMNL GTGKRRELSN EWKALCVEEL KLNINKLRFS AKLAEAANDG
301: K
Arabidopsis Description
GPL2GLABROUS1 enhancer-binding protein-like 2 [Source:UniProtKB/Swiss-Prot;Acc:P0DKL0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.