Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70351 | Canola | cytosol | 55.7 | 51.88 |
| CDY11715 | Canola | cytosol | 53.02 | 49.69 |
| CDX77598 | Canola | nucleus | 24.83 | 30.08 |
| CDY72668 | Canola | cytosol, nucleus | 32.21 | 16.96 |
| CDY26991 | Canola | nucleus | 31.54 | 15.61 |
| CDY43727 | Canola | cytosol | 31.54 | 14.92 |
| CDY38562 | Canola | nucleus | 30.2 | 14.9 |
| AT2G36340.1 | Thale cress | cytosol | 40.94 | 14.73 |
| CDY62667 | Canola | nucleus | 24.83 | 14.68 |
| CDY70352 | Canola | nucleus | 26.17 | 14.39 |
| CDY11716 | Canola | nucleus | 25.5 | 13.19 |
| CDX98195 | Canola | nucleus | 25.5 | 12.34 |
Protein Annotations
| EnsemblPlants:CDX98194 | EnsemblPlantsGene:GSBRNA2T00105653001 | PANTHER:PTHR31662 | PANTHER:PTHR31662:SF1 | ProteinID:CDX98194 | ProteinID:CDX98194.1 |
| UniParc:UPI0004EDD9AC | MapMan:35.2 | : | : | : | : |
Description
BnaC07g09040D
Coordinates
chrLK031903:-:636106..636640
Molecular Weight (calculated)
17550.9 Da
IEP (calculated)
9.071
GRAVY (calculated)
-0.857
Length
149 amino acids
Sequence
(BLAST)
(BLAST)
001: MRFNFYSQRS KDGKQFSFTN SYEKELFRLS TIIWAKNETE DTFSENRQDQ AKVNRPLVKQ KRVNDTRMDK DKSEELGVMD EFDALQDALE ASTSFQILGK
101: TQQKMLFQNL KTLGAQRRKE LAGEWKSLLN EEMELHMKKL TFFAQLSCA
101: TQQKMLFQNL KTLGAQRRKE LAGEWKSLLN EEMELHMKKL TFFAQLSCA
001: MVGTKRVADS IDTNSDDTLT RNREVEVEAM LSRRKQLRTT TTRTTTTRTT PLSLSSSASK MNWSKNDELV ILGGIVDYEN ETKLSYRSDW DALYRYIKDC
101: VEAKFSKIQL INKVKNMKRK FTYNQGRSNH GEQLSFTNTD DDEIFKLSLI IWDKNESEYV SNENIDQAKD VPSGEPETND VPCEEQDDRD VPCEEQERAN
201: IEIDNGVREK LDQAKDVPCV EQESEDVPCV EQERVSIEID NGEKEKLDQT MDCEEQENTD VLCEEKGDKD VPCEEQENKD VPCEEQERVS IEIDNGEEEM
301: SSEEDGVDEV GVMEDTLDSG ISFQGLGKNG VKDKSEEDDV VELGVLQEIF KEDTFFQSLG RYQQKLLLQN LENVGVERRK ELINEWKALF VDEQRLCVKK
401: LTFAAKLANL GVSP
101: VEAKFSKIQL INKVKNMKRK FTYNQGRSNH GEQLSFTNTD DDEIFKLSLI IWDKNESEYV SNENIDQAKD VPSGEPETND VPCEEQDDRD VPCEEQERAN
201: IEIDNGVREK LDQAKDVPCV EQESEDVPCV EQERVSIEID NGEKEKLDQT MDCEEQENTD VLCEEKGDKD VPCEEQENKD VPCEEQERVS IEIDNGEEEM
301: SSEEDGVDEV GVMEDTLDSG ISFQGLGKNG VKDKSEEDDV VELGVLQEIF KEDTFFQSLG RYQQKLLLQN LENVGVERRK ELINEWKALF VDEQRLCVKK
401: LTFAAKLANL GVSP
Arabidopsis Description
GPL3GLABROUS1 enhancer-binding protein-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJM4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.