Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72668 | Canola | cytosol, nucleus | 81.27 | 90.46 |
| Bra017244.1-P | Field mustard | nucleus | 43.49 | 36.34 |
| CDY11715 | Canola | cytosol | 17.78 | 35.22 |
| CDY70351 | Canola | cytosol | 17.78 | 35.0 |
| CDX77598 | Canola | nucleus | 12.38 | 31.71 |
| CDX98194 | Canola | cytosol | 14.92 | 31.54 |
| CDY38562 | Canola | nucleus | 20.0 | 20.86 |
| CDY26991 | Canola | nucleus | 19.05 | 19.93 |
| CDY62667 | Canola | nucleus | 15.24 | 19.05 |
| CDY70352 | Canola | nucleus | 14.92 | 17.34 |
| CDY11716 | Canola | nucleus | 14.6 | 15.97 |
| CDX98195 | Canola | nucleus | 14.92 | 15.26 |
Protein Annotations
| EnsemblPlants:CDY43727 | EnsemblPlantsGene:GSBRNA2T00077216001 | ncoils:Coil | ProteinID:CDY43727 | ProteinID:CDY43727.1 | SEG:seg |
| UniParc:UPI0004EDFF34 | UniProt:A0A078I0V7 | MapMan:35.1 | : | : | : |
Description
BnaAnng07420DBnaAnng07420D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I0V7]
Coordinates
chrLK032567:-:87591..89688
Molecular Weight (calculated)
36028.8 Da
IEP (calculated)
4.060
GRAVY (calculated)
-0.807
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MIADVQDYHI SCSIILLQFD WIQGRRLRLR CLIFDAPCVE HEKVSESNMD QAKDVPCVEH ERVDENIEQA KDASLVEHER VDENMEQAKD VPCVEHEPVD
101: ENMDQAKDLP CVEDERVDEN VDQGKVLDLD KDAPCVERER VNENMDLGQE KDVPCVEHEL VNENMDPEEV EMAVPCAEDG PLSNVSIETD KGEKEKSEEE
201: FVAMKDALTD KDNNEEDGVD EFCATKDALT DKDKSEEDSV DEYCALKDAL EETTFFQSIG KYQQKVLLQN LKNLRGPRRK ELADELKELL DEEMKVRCKK
301: LSLSAKLASA WEESC
101: ENMDQAKDLP CVEDERVDEN VDQGKVLDLD KDAPCVERER VNENMDLGQE KDVPCVEHEL VNENMDPEEV EMAVPCAEDG PLSNVSIETD KGEKEKSEEE
201: FVAMKDALTD KDNNEEDGVD EFCATKDALT DKDKSEEDSV DEYCALKDAL EETTFFQSIG KYQQKVLLQN LKNLRGPRRK ELADELKELL DEEMKVRCKK
301: LSLSAKLASA WEESC
001: MVGTKRVADS IDTNSDDTLT RNREVEVEAM LSRRKQLRTT TTRTTTTRTT PLSLSSSASK MNWSKNDELV ILGGIVDYEN ETKLSYRSDW DALYRYIKDC
101: VEAKFSKIQL INKVKNMKRK FTYNQGRSNH GEQLSFTNTD DDEIFKLSLI IWDKNESEYV SNENIDQAKD VPSGEPETND VPCEEQDDRD VPCEEQERAN
201: IEIDNGVREK LDQAKDVPCV EQESEDVPCV EQERVSIEID NGEKEKLDQT MDCEEQENTD VLCEEKGDKD VPCEEQENKD VPCEEQERVS IEIDNGEEEM
301: SSEEDGVDEV GVMEDTLDSG ISFQGLGKNG VKDKSEEDDV VELGVLQEIF KEDTFFQSLG RYQQKLLLQN LENVGVERRK ELINEWKALF VDEQRLCVKK
401: LTFAAKLANL GVSP
101: VEAKFSKIQL INKVKNMKRK FTYNQGRSNH GEQLSFTNTD DDEIFKLSLI IWDKNESEYV SNENIDQAKD VPSGEPETND VPCEEQDDRD VPCEEQERAN
201: IEIDNGVREK LDQAKDVPCV EQESEDVPCV EQERVSIEID NGEKEKLDQT MDCEEQENTD VLCEEKGDKD VPCEEQENKD VPCEEQERVS IEIDNGEEEM
301: SSEEDGVDEV GVMEDTLDSG ISFQGLGKNG VKDKSEEDDV VELGVLQEIF KEDTFFQSLG RYQQKLLLQN LENVGVERRK ELINEWKALF VDEQRLCVKK
401: LTFAAKLANL GVSP
Arabidopsis Description
GPL3GLABROUS1 enhancer-binding protein-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJM4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.