Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11715 | Canola | cytosol | 91.88 | 92.45 |
| CDX98194 | Canola | cytosol | 51.88 | 55.7 |
| CDX77598 | Canola | nucleus | 18.12 | 23.58 |
| CDY26991 | Canola | nucleus | 38.12 | 20.27 |
| CDY62667 | Canola | nucleus | 31.25 | 19.84 |
| CDY72668 | Canola | cytosol, nucleus | 35.0 | 19.79 |
| CDY38562 | Canola | nucleus | 36.88 | 19.54 |
| CDY70352 | Canola | nucleus | 31.88 | 18.82 |
| CDY43727 | Canola | cytosol | 35.0 | 17.78 |
| CDY11716 | Canola | nucleus | 31.25 | 17.36 |
| AT2G36340.1 | Thale cress | cytosol | 43.12 | 16.67 |
| CDX98195 | Canola | nucleus | 30.0 | 15.58 |
Protein Annotations
| EnsemblPlants:CDY70351 | EnsemblPlantsGene:GSBRNA2T00098212001 | PANTHER:PTHR31662 | PANTHER:PTHR31662:SF1 | ProteinID:CDY70351 | ProteinID:CDY70351.1 |
| UniParc:UPI0004EE90A6 | UniProt:A0A078JY18 | MapMan:15.5.28 | : | : | : |
Description
BnaCnng67950DBnaCnng67950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JY18]
Coordinates
chrLK041852:-:93..939
Molecular Weight (calculated)
18913.9 Da
IEP (calculated)
8.409
GRAVY (calculated)
-0.667
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRRRKQQKK YLIWNIKDVL LILKGIVEYE NERGFRYNSD WDIFYGYTKD LINIRFSKKQ LMEEDVPLVE QKQVNDTRID KDKSEELGGM DEFDALQDAL
101: EASTSFQSVG KTQQKMLFQN LKTLGAQRRK ELAGEWKALL NEEMELHMQK LTFLAKLPCA
101: EASTSFQSVG KTQQKMLFQN LKTLGAQRRK ELAGEWKALL NEEMELHMQK LTFLAKLPCA
001: MLFYLYVTRC KQLLNYNNME TDNGDKEKSE EDDLCALKDA LEAVILFQGL SEYQKKLMFP NLKNLGAETI KELIDEWKEL NVEELNLNIK KQTFFTKFAN
101: ASWSLMLLIQ QENNFCFWMF YVIPTSLFFV CCVLLHLLND GS
101: ASWSLMLLIQ QENNFCFWMF YVIPTSLFFV CCVLLHLLND GS
Arabidopsis Description
Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q9FFS7]
SUBAcon: [mitochondrion,plastid,extracellular,cytosol]
SUBAcon: [mitochondrion,plastid,extracellular,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.