Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11715 | Canola | cytosol | 16.67 | 43.4 |
| CDY70351 | Canola | cytosol | 16.67 | 43.12 |
| CDX98194 | Canola | cytosol | 14.73 | 40.94 |
| AT5G14280.1 | Thale cress | nucleus | 20.77 | 28.57 |
| AT3G07710.1 | Thale cress | cytosol, mitochondrion, nucleus | 9.9 | 28.28 |
| AT5G41530.1 | Thale cress | cytosol, extracellular, mitochondrion, plastid | 9.18 | 26.76 |
| AT4G00270.1 | Thale cress | nucleus | 18.6 | 25.5 |
| AT2G25650.1 | Thale cress | nucleus | 22.46 | 24.09 |
Protein Annotations
| MapMan:15.5.28 | EntrezGene:818207 | ProteinID:AAD21432.1 | EMBL:AB493578 | ProteinID:AEC09235.1 | ArrayExpress:AT2G36340 |
| EnsemblPlantsGene:AT2G36340 | RefSeq:AT2G36340 | TAIR:AT2G36340 | RefSeq:AT2G36340-TAIR-G | EnsemblPlants:AT2G36340.1 | TAIR:AT2G36340.1 |
| EMBL:AY501338 | EMBL:AY501339 | EMBL:AY773863 | InterPro:GEBP | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| RefSeq:NP_181175.1 | PFAM:PF04504 | PO:PO:0000293 | PO:PO:0009010 | PO:PO:0009066 | PANTHER:PTHR31662 |
| PANTHER:PTHR31662:SF1 | UniProt:Q9SJM4 | UniParc:UPI000009EB0D | SEG:seg | : | : |
Description
GPL3GLABROUS1 enhancer-binding protein-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJM4]
Coordinates
chr2:+:15235487..15237904
Molecular Weight (calculated)
47341.6 Da
IEP (calculated)
4.113
GRAVY (calculated)
-0.890
Length
414 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGTKRVADS IDTNSDDTLT RNREVEVEAM LSRRKQLRTT TTRTTTTRTT PLSLSSSASK MNWSKNDELV ILGGIVDYEN ETKLSYRSDW DALYRYIKDC
101: VEAKFSKIQL INKVKNMKRK FTYNQGRSNH GEQLSFTNTD DDEIFKLSLI IWDKNESEYV SNENIDQAKD VPSGEPETND VPCEEQDDRD VPCEEQERAN
201: IEIDNGVREK LDQAKDVPCV EQESEDVPCV EQERVSIEID NGEKEKLDQT MDCEEQENTD VLCEEKGDKD VPCEEQENKD VPCEEQERVS IEIDNGEEEM
301: SSEEDGVDEV GVMEDTLDSG ISFQGLGKNG VKDKSEEDDV VELGVLQEIF KEDTFFQSLG RYQQKLLLQN LENVGVERRK ELINEWKALF VDEQRLCVKK
401: LTFAAKLANL GVSP
101: VEAKFSKIQL INKVKNMKRK FTYNQGRSNH GEQLSFTNTD DDEIFKLSLI IWDKNESEYV SNENIDQAKD VPSGEPETND VPCEEQDDRD VPCEEQERAN
201: IEIDNGVREK LDQAKDVPCV EQESEDVPCV EQERVSIEID NGEKEKLDQT MDCEEQENTD VLCEEKGDKD VPCEEQENKD VPCEEQERVS IEIDNGEEEM
301: SSEEDGVDEV GVMEDTLDSG ISFQGLGKNG VKDKSEEDDV VELGVLQEIF KEDTFFQSLG RYQQKLLLQN LENVGVERRK ELINEWKALF VDEQRLCVKK
401: LTFAAKLANL GVSP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.