Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G25650.1 | Thale cress | nucleus | 80.13 | 62.69 |
| CDX77598 | Canola | nucleus | 22.19 | 54.47 |
| AT5G14280.1 | Thale cress | nucleus | 51.32 | 51.49 |
| CDY62667 | Canola | nucleus | 40.4 | 48.41 |
| CDY70352 | Canola | nucleus | 41.06 | 45.76 |
| CDY11716 | Canola | nucleus | 40.4 | 42.36 |
| CDX98195 | Canola | nucleus | 38.41 | 37.66 |
| AT3G07710.1 | Thale cress | cytosol, mitochondrion, nucleus | 14.9 | 31.03 |
| AT5G41530.1 | Thale cress | cytosol, extracellular, mitochondrion, plastid | 13.91 | 29.58 |
| AT2G36340.1 | Thale cress | cytosol | 25.5 | 18.6 |
Protein Annotations
| MapMan:15.5.28 | EntrezGene:827164 | UniProt:A0A178UT32 | ProteinID:AAB62831.1 | ProteinID:AAF02789.1 | ProteinID:AEE81848.1 |
| EMBL:AF361590 | ArrayExpress:AT4G00270 | EnsemblPlantsGene:AT4G00270 | RefSeq:AT4G00270 | TAIR:AT4G00270 | RefSeq:AT4G00270-TAIR-G |
| EnsemblPlants:AT4G00270.1 | TAIR:AT4G00270.1 | EMBL:AY074837 | Unigene:At.28698 | ProteinID:CAB80785.1 | ncoils:Coil |
| InterPro:GEBP | GO:GO:0001158 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005730 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | RefSeq:NP_567163.1 | ProteinID:OAO97176.1 | PFAM:PF04504 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR31662 |
| PANTHER:PTHR31662:SF1 | UniProt:Q9ASZ1 | UniParc:UPI00000A6EEC | SEG:seg | : | : |
Description
GEBPGLABROUS1 enhancer-binding protein [Source:UniProtKB/Swiss-Prot;Acc:Q9ASZ1]
Coordinates
chr4:-:117085..118643
Molecular Weight (calculated)
34059.8 Da
IEP (calculated)
6.032
GRAVY (calculated)
-0.947
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: MVTPKQIDFS SCVGADNSNG TLSHRRSPRN IPSSKRAASV AEEETMKKKM KMKKKKKKLD PPLIVRIWNE EDELSILKGL VDYRAKTGFN PKIDWDAFCS
101: FLGSSIVERF SKDQVLSKIR KLKRRFHVHS EKINQGNDPK FTRSSDSEAF GFSSMIWGQG DDDGMDKEHE VNGNGAAENR TNESGEEMLK EHEEEVANTE
201: LLNENGAAKT TENGTSSGKE RHDEDNDDDD ELCAVQDAFE AVMSQGLSGY QKKLQLEKLM NLGNGKRREL SDEWKALCVE ETRFNIKKLR FSAKLAEAAN
301: DS
101: FLGSSIVERF SKDQVLSKIR KLKRRFHVHS EKINQGNDPK FTRSSDSEAF GFSSMIWGQG DDDGMDKEHE VNGNGAAENR TNESGEEMLK EHEEEVANTE
201: LLNENGAAKT TENGTSSGKE RHDEDNDDDD ELCAVQDAFE AVMSQGLSGY QKKLQLEKLM NLGNGKRREL SDEWKALCVE ETRFNIKKLR FSAKLAEAAN
301: DS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.