Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G00270.1 | Thale cress | nucleus | 51.49 | 51.32 |
| CDY26991 | Canola | nucleus | 42.52 | 42.52 |
| CDY38562 | Canola | nucleus | 42.19 | 42.05 |
| Bra039500.1-P | Field mustard | nucleus | 41.86 | 42.0 |
| AT2G25650.1 | Thale cress | nucleus | 52.16 | 40.67 |
| AT5G41530.1 | Thale cress | cytosol, extracellular, mitochondrion, plastid | 14.95 | 31.69 |
| AT3G07710.1 | Thale cress | cytosol, mitochondrion, nucleus | 14.29 | 29.66 |
| AT2G36340.1 | Thale cress | cytosol | 28.57 | 20.77 |
Protein Annotations
| MapMan:15.5.28 | EntrezGene:831278 | ProteinID:AED92012.2 | ArrayExpress:AT5G14280 | EnsemblPlantsGene:AT5G14280 | RefSeq:AT5G14280 |
| TAIR:AT5G14280 | RefSeq:AT5G14280-TAIR-G | EnsemblPlants:AT5G14280.1 | TAIR:AT5G14280.1 | ProteinID:CAB87767.1 | ncoils:Coil |
| InterPro:GEBP | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| RefSeq:NP_001318559.1 | UniProt:P0DKL0 | PFAM:PF04504 | PO:PO:0000293 | PANTHER:PTHR31662 | PANTHER:PTHR31662:SF1 |
| UniParc:UPI0008029460 | SEG:seg | : | : | : | : |
Description
GPL2GLABROUS1 enhancer-binding protein-like 2 [Source:UniProtKB/Swiss-Prot;Acc:P0DKL0]
Coordinates
chr5:+:4608745..4610448
Molecular Weight (calculated)
33722.7 Da
IEP (calculated)
6.690
GRAVY (calculated)
-0.907
Length
301 amino acids
Sequence
(BLAST)
(BLAST)
001: MATPTELGFS SPGGGGDDSD DNPPQKRTSK RTASETATEE ETKKKKKKKT KHNTKMASPP SNRIWNEEDE LSILKGLVDF RAKTGLESKI DWDAFYCYVK
101: GSIHVKVSKC QLMSKTRKLK KKFLDQMEKI DQGNDPHFTR SSETEAFGYS MMIWRKIDAE YTNGVMDKAH QSESGEEVFE EDEEVALIDK GAAKSGKSPH
201: EAVVVVDKIT TKKNGTAGKE SDDDDDDVLC AVRDAFETTM MSQGLSDYQK KLQLEKLMNL GTGKRRELSN EWKALCVEEL KLNINKLRFS AKLAEAANDG
301: K
101: GSIHVKVSKC QLMSKTRKLK KKFLDQMEKI DQGNDPHFTR SSETEAFGYS MMIWRKIDAE YTNGVMDKAH QSESGEEVFE EDEEVALIDK GAAKSGKSPH
201: EAVVVVDKIT TKKNGTAGKE SDDDDDDVLC AVRDAFETTM MSQGLSDYQK KLQLEKLMNL GTGKRRELSN EWKALCVEEL KLNINKLRFS AKLAEAANDG
301: K
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.