Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY38562 | Canola | nucleus | 98.0 | 97.35 |
| AT5G14280.1 | Thale cress | nucleus | 42.0 | 41.86 |
| Bra017244.1-P | Field mustard | nucleus | 29.33 | 23.34 |
Protein Annotations
| EnsemblPlants:Bra039500.1 | EnsemblPlants:Bra039500.1-P | EnsemblPlantsGene:Bra039500 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:GEBP | PANTHER:PTHR31662 | PANTHER:PTHR31662:SF1 |
| PFAM:PF04504 | SEG:seg | UniParc:UPI000254742F | UniProt:M4FEH9 | MapMan:15.5.28 | : |
Description
AT5G14280 (E=7e-032) | DNA-binding storekeeper protein-related
Coordinates
chrA05:-:9536224..9537362
Molecular Weight (calculated)
34163.1 Da
IEP (calculated)
5.777
GRAVY (calculated)
-0.870
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRLNFSDTS LQNSPSEEVS TKKNKNKKKK LASPVIKRIW NEDDELSILK GLVEYRVKTR HDPSFDWDGF FCSVQGSIHV RFSKEQLFSK VRKLRRKFVL
101: HMERIDRGED PLFTRLTDSQ AFGYSNMIWG LNQAEVAANA GGTEKAPGDT QEDEHLDNAG HVNYNGVESS KLDGKESEFA NGGMESVMQI ESDENGFREN
201: GRVSNDEPVN ENGAEKGEVD GKETHDDELR VVEDAFETTI LQGLSDWQRK LQLKKLMMNL GTEKRKELSN EWKALCSEEV KLKIKKLRFT VKLVEAANDG
101: HMERIDRGED PLFTRLTDSQ AFGYSNMIWG LNQAEVAANA GGTEKAPGDT QEDEHLDNAG HVNYNGVESS KLDGKESEFA NGGMESVMQI ESDENGFREN
201: GRVSNDEPVN ENGAEKGEVD GKETHDDELR VVEDAFETTI LQGLSDWQRK LQLKKLMMNL GTEKRKELSN EWKALCSEEV KLKIKKLRFT VKLVEAANDG
001: MVTPKQIDFS SCGGGDNSDD TLSHRESPRN PSSKRAAASF AAEAGEETMK KKKKKKKKNL GPPLIVRIWN EEDELSILKG LVDYRAKTGF NPKIDWDAFY
101: SFLGSSIVAK FSKEQVLSKI RKLKRRFHVH WEKISEGNDP KFTRSSDSEA FGFSSMIWGQ GEFGNDDGMD KEMVKEHDVN GNGAAENGTA RIAQENESGE
201: EMLKEHEETL NENGAEEIRD NDETARKAQQ LESESEEEML KEHEEPFNEN GAENIRDNNG TTQIAQQSES ESEEMLKEHE EVANTELVNE NGAAKTTENG
301: TTGGKERHDD DDDDELCAVQ DAFEAVMSQG LSGYQKKLQL EKLMNLGTGK RRELSDEWKA LCVEERRLNI KKLRFSAKLA EAANDS
101: SFLGSSIVAK FSKEQVLSKI RKLKRRFHVH WEKISEGNDP KFTRSSDSEA FGFSSMIWGQ GEFGNDDGMD KEMVKEHDVN GNGAAENGTA RIAQENESGE
201: EMLKEHEETL NENGAEEIRD NDETARKAQQ LESESEEEML KEHEEPFNEN GAENIRDNNG TTQIAQQSES ESEEMLKEHE EVANTELVNE NGAAKTTENG
301: TTGGKERHDD DDDDELCAVQ DAFEAVMSQG LSGYQKKLQL EKLMNLGTGK RRELSDEWKA LCVEERRLNI KKLRFSAKLA EAANDS
Arabidopsis Description
GPL1GLABROUS1 enhancer-binding protein-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYD2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.