Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72668 | Canola | cytosol, nucleus | 37.4 | 49.82 |
| CDY43727 | Canola | cytosol | 36.34 | 43.49 |
| Bra039500.1-P | Field mustard | nucleus | 23.34 | 29.33 |
Protein Annotations
| EnsemblPlants:Bra017244.1 | EnsemblPlants:Bra017244.1-P | EnsemblPlantsGene:Bra017244 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:GEBP | ncoils:Coil | PANTHER:PTHR31662 |
| PANTHER:PTHR31662:SF1 | PFAM:PF04504 | SEG:seg | UniParc:UPI0002544066 | UniProt:M4DL63 | MapMan:15.5.28 |
Description
AT2G36340 (E=1e-051) | DNA-binding storekeeper protein-related
Coordinates
chrA04:-:15774327..15776242
Molecular Weight (calculated)
43162.8 Da
IEP (calculated)
4.306
GRAVY (calculated)
-1.020
Length
377 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLGKRTREH STDSNDKPIS SSPLRKMQED DVSGVESMLR RRKQPKTTPV SSSSNNKMNW TKDDELIILG SIVDYEKETK LSHRSDWYAF YGYVKDFIEA
101: EFSKKQLTDK IRNLNKRFLG NKARCDDEEG PSFTDTEDDI IFKLSVIIWD STNETVCDSD ENVDQGKVDA PCVEHEKVSE SNMDQAKDVP CVEHERVDEN
201: IEQAKDAPLV EHERVDENME QEKDLPCVED ERVDKNVDQG KVLDLDKDAP AVEHEPTNEN MDLDQEKDAL TDKDNNEEDG VDEFCAMKDA LADKEKSEED
301: SADEYCALKD ALEETTFFQS IGKYQQKALL QNLKNLRGPR RKELADELKD LLDEEMKVRG KKLSLSAKLA SAWEESC
101: EFSKKQLTDK IRNLNKRFLG NKARCDDEEG PSFTDTEDDI IFKLSVIIWD STNETVCDSD ENVDQGKVDA PCVEHEKVSE SNMDQAKDVP CVEHERVDEN
201: IEQAKDAPLV EHERVDENME QEKDLPCVED ERVDKNVDQG KVLDLDKDAP AVEHEPTNEN MDLDQEKDAL TDKDNNEEDG VDEFCAMKDA LADKEKSEED
301: SADEYCALKD ALEETTFFQS IGKYQQKALL QNLKNLRGPR RKELADELKD LLDEEMKVRG KKLSLSAKLA SAWEESC
001: MVGTKRVADS IDTNSDDTLT RNREVEVEAM LSRRKQLRTT TTRTTTTRTT PLSLSSSASK MNWSKNDELV ILGGIVDYEN ETKLSYRSDW DALYRYIKDC
101: VEAKFSKIQL INKVKNMKRK FTYNQGRSNH GEQLSFTNTD DDEIFKLSLI IWDKNESEYV SNENIDQAKD VPSGEPETND VPCEEQDDRD VPCEEQERAN
201: IEIDNGVREK LDQAKDVPCV EQESEDVPCV EQERVSIEID NGEKEKLDQT MDCEEQENTD VLCEEKGDKD VPCEEQENKD VPCEEQERVS IEIDNGEEEM
301: SSEEDGVDEV GVMEDTLDSG ISFQGLGKNG VKDKSEEDDV VELGVLQEIF KEDTFFQSLG RYQQKLLLQN LENVGVERRK ELINEWKALF VDEQRLCVKK
401: LTFAAKLANL GVSP
101: VEAKFSKIQL INKVKNMKRK FTYNQGRSNH GEQLSFTNTD DDEIFKLSLI IWDKNESEYV SNENIDQAKD VPSGEPETND VPCEEQDDRD VPCEEQERAN
201: IEIDNGVREK LDQAKDVPCV EQESEDVPCV EQERVSIEID NGEKEKLDQT MDCEEQENTD VLCEEKGDKD VPCEEQENKD VPCEEQERVS IEIDNGEEEM
301: SSEEDGVDEV GVMEDTLDSG ISFQGLGKNG VKDKSEEDDV VELGVLQEIF KEDTFFQSLG RYQQKLLLQN LENVGVERRK ELINEWKALF VDEQRLCVKK
401: LTFAAKLANL GVSP
Arabidopsis Description
GPL3GLABROUS1 enhancer-binding protein-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJM4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.