Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G41530.1 | Thale cress | cytosol, extracellular, mitochondrion, plastid | 25.52 | 26.06 |
| AT4G00270.1 | Thale cress | nucleus | 31.03 | 14.9 |
| AT5G14280.1 | Thale cress | nucleus | 29.66 | 14.29 |
| AT2G25650.1 | Thale cress | nucleus | 33.79 | 12.69 |
| AT2G36340.1 | Thale cress | cytosol | 28.28 | 9.9 |
Protein Annotations
| ArrayExpress:AT3G07710 | EnsemblPlants:AT3G07710.1 | EnsemblPlantsGene:AT3G07710 | EntrezGene:819962 | GO:GO:0008150 | ProteinID:AAF13089.1 |
| ProteinID:AAF21181.1 | ProteinID:AEE74591.1 | RefSeq:AT3G07710 | RefSeq:AT3G07710-TAIR-G | RefSeq:NP_187428.1 | SEG:seg |
| TAIR:AT3G07710 | TAIR:AT3G07710.1 | Unigene:At.65070 | UniParc:UPI00000A27BB | UniProt:Q9S6Z9 | MapMan:35.2 |
Description
F17A17.5 protein [Source:UniProtKB/TrEMBL;Acc:Q9S6Z9]
Coordinates
chr3:-:2464336..2464773
Molecular Weight (calculated)
16457.0 Da
IEP (calculated)
4.587
GRAVY (calculated)
-1.030
Length
145 amino acids
Sequence
(BLAST)
(BLAST)
001: MENETGGKDR EVVEAVTNSE PGNGDGFAKK GDSYDDKLPS ENVDKHMENE ANEKEKEEDG AADELCALQD ALETTLFQHL SNYAQKQMLQ KLRSLRAKER
101: KELSGEWKSL LAQEALLKSK KYSFSAELAN ATFHTWEEET RRMVL
101: KELSGEWKSL LAQEALLKSK KYSFSAELAN ATFHTWEEET RRMVL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.