Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU0Hr1G017080.1 | |
| HORVU6Hr1G036020.1 | |
| HORVU7Hr1G000780.1 | |
| HORVU7Hr1G041170.1 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G551900.1 | Wheat | cytosol | 69.82 | 92.55 |
| TraesCS5D01G538300.1 | Wheat | cytosol | 69.23 | 91.76 |
| TraesCS4A01G333800.1 | Wheat | cytosol | 69.23 | 91.76 |
| HORVU5Hr1G121940.5 | Barley | cytosol | 54.44 | 73.9 |
| HORVU5Hr1G122080.1 | Barley | cytosol | 52.07 | 71.26 |
| Os03t0850700-01 | Rice | cytosol | 52.96 | 68.58 |
| EER90511 | Sorghum | cytosol | 50.59 | 68.4 |
| Zm00001d012847_P001 | Maize | cytosol | 50.0 | 61.23 |
| GSMUA_Achr4P15920_001 | Banana | cytosol | 41.42 | 53.23 |
| VIT_01s0150g00170.t01 | Wine grape | cytosol | 37.57 | 51.63 |
| Bra032645.1-P | Field mustard | cytosol | 34.91 | 51.08 |
| Bra033247.1-P | Field mustard | cytosol | 37.57 | 49.8 |
| CDX90047 | Canola | cytosol | 37.57 | 49.8 |
| AT1G01630.1 | Thale cress | cytosol | 36.98 | 49.02 |
| CDY15164 | Canola | cytosol | 36.69 | 48.63 |
| KRH41051 | Soybean | cytosol | 35.5 | 48.39 |
| VIT_17s0000g00130.t01 | Wine grape | cytosol | 36.39 | 48.05 |
| HORVU3Hr1G096280.6 | Barley | plastid | 42.6 | 46.75 |
| CDY38020 | Canola | cytosol | 35.8 | 46.18 |
| KRH54081 | Soybean | cytosol | 35.21 | 44.91 |
| Solyc03g118150.2.1 | Tomato | cytosol | 35.5 | 44.28 |
| PGSC0003DMT400036745 | Potato | cytosol | 35.5 | 44.28 |
| KRH63881 | Soybean | cytosol | 34.02 | 43.56 |
| HORVU3Hr1G096290.4 | Barley | plastid | 41.12 | 39.49 |
| Solyc06g068800.2.1 | Tomato | cytosol | 35.21 | 38.51 |
| PGSC0003DMT400065724 | Potato | cytosol | 34.91 | 38.19 |
| KRH59732 | Soybean | endoplasmic reticulum, golgi | 32.25 | 38.11 |
| HORVU4Hr1G009310.1 | Barley | cytosol | 19.82 | 22.95 |
| HORVU4Hr1G009190.1 | Barley | cytosol | 19.82 | 22.95 |
| HORVU4Hr1G009210.2 | Barley | cytosol | 19.53 | 22.6 |
| HORVU4Hr1G005090.2 | Barley | cytosol | 8.58 | 22.31 |
| HORVU4Hr1G074380.1 | Barley | cytosol | 9.17 | 22.3 |
| HORVU6Hr1G021650.1 | Barley | cytosol, mitochondrion, nucleus | 8.88 | 21.58 |
| HORVU3Hr1G037050.3 | Barley | nucleus | 19.82 | 20.62 |
| HORVU0Hr1G022240.10 | Barley | mitochondrion | 15.68 | 20.23 |
| HORVU5Hr1G114590.3 | Barley | mitochondrion | 7.1 | 19.67 |
| HORVU7Hr1G021120.1 | Barley | cytosol | 16.27 | 19.5 |
| HORVU3Hr1G080050.1 | Barley | cytosol, mitochondrion, plastid | 8.88 | 19.23 |
| HORVU5Hr1G020290.3 | Barley | plastid | 8.58 | 18.95 |
| HORVU6Hr1G075070.1 | Barley | nucleus | 19.53 | 16.38 |
| HORVU4Hr1G067410.4 | Barley | plastid | 15.38 | 10.42 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G121860.2 | EnsemblPlantsGene:HORVU5Hr1G121860 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom |
| InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF158 | PFAM:PF00650 |
| PFscan:PS50191 | SEG:seg | SMART:SM00516 | SMART:SM01100 | SUPFAM:SSF46938 | SUPFAM:SSF52087 |
| UniParc:UPI000B4795E3 | UniProt:A0A287SZK4 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:660947356..660951956
Molecular Weight (calculated)
38228.4 Da
IEP (calculated)
9.511
GRAVY (calculated)
-0.538
Length
338 amino acids
Sequence
(BLAST)
(BLAST)
001: PGVNFDDLRR HFTRRRRADS PCTAQLGRTH LFLHTLSSQP QLSHSSAAIK SRASRASEPL SLSTWFCSSR IAARQSTEEG GRGSGMDCGG EEQARQNGHG
101: GDPAEWKKVA ELRAVVEAQD PAAKEEDDFM LRRFLRAREQ NINKASSMFL KYLSWKGTAK PHGSITEAEV RGELVQDKLY VQGFDKVGRP MIYLFGNRHF
201: AAKRDLEEFK RYVVYILDNT CTKLPAGQEK FASVVDLKGW GYANCDIRAK LAALEIMQNY YPERLGRVFL IHVPYVFMAA WKMVYPFIDD NTKRKFVFVA
301: DKDLDATLRD AIDVSQLPEQ YGGKLRLEGY KSSSSPPS
101: GDPAEWKKVA ELRAVVEAQD PAAKEEDDFM LRRFLRAREQ NINKASSMFL KYLSWKGTAK PHGSITEAEV RGELVQDKLY VQGFDKVGRP MIYLFGNRHF
201: AAKRDLEEFK RYVVYILDNT CTKLPAGQEK FASVVDLKGW GYANCDIRAK LAALEIMQNY YPERLGRVFL IHVPYVFMAA WKMVYPFIDD NTKRKFVFVA
301: DKDLDATLRD AIDVSQLPEQ YGGKLRLEGY KSSSSPPS
001: MENKETKQEP AAAAEQKTVP LIEDEIERSK VGIMRALCDR QDPETKEVDD LMIRRFLRAR DLDIEKASTM FLNYLTWKRS MLPKGHIPEA EIANDLSHNK
101: MCMQGHDKMG RPIAVAIGNR HNPSKGNPDE FKRFVVYTLE KICARMPRGQ EKFVAIGDLQ GWGYSNCDIR GYLAALSTLQ DCYPERLGKL YIVHAPYIFM
201: TAWKVIYPFI DANTKKKIVF VENKKLTPTL LEDIDESQLP DIYGGKLPLV PIQET
101: MCMQGHDKMG RPIAVAIGNR HNPSKGNPDE FKRFVVYTLE KICARMPRGQ EKFVAIGDLQ GWGYSNCDIR GYLAALSTLQ DCYPERLGKL YIVHAPYIFM
201: TAWKVIYPFI DANTKKKIVF VENKKLTPTL LEDIDESQLP DIYGGKLPLV PIQET
Arabidopsis Description
Polyphosphoinositide binding protein, putative [Source:UniProtKB/TrEMBL;Acc:Q9LQ96]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.