Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G331400.1 | Wheat | nucleus | 95.29 | 95.29 |
| TraesCS6D01G281700.1 | Wheat | nucleus | 92.06 | 94.4 |
| TraesCS6A01G302200.1 | Wheat | nucleus | 94.04 | 94.04 |
| EES05517 | Sorghum | cytosol | 67.49 | 77.71 |
| Zm00001d052231_P003 | Maize | cytosol | 65.76 | 75.71 |
| Os02t0752000-01 | Rice | cytosol | 70.72 | 75.4 |
| CDY38239 | Canola | cytosol | 9.68 | 61.9 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 46.9 | 60.0 |
| Bra012311.1-P | Field mustard | cytosol | 42.18 | 55.74 |
| CDY56380 | Canola | cytosol | 42.18 | 55.74 |
| GSMUA_Achr3P04420_001 | Banana | cytosol | 46.15 | 55.69 |
| CDY00428 | Canola | cytosol | 41.69 | 55.08 |
| AT1G22180.4 | Thale cress | cytosol | 42.43 | 54.46 |
| AT4G08690.2 | Thale cress | cytosol | 40.45 | 54.15 |
| KRH18888 | Soybean | cytosol | 43.92 | 53.15 |
| KRH16691 | Soybean | cytosol | 43.67 | 53.01 |
| CDY05023 | Canola | cytosol | 40.94 | 52.55 |
| Bra000655.1-P | Field mustard | cytosol | 40.2 | 52.43 |
| CDX90694 | Canola | cytosol | 40.2 | 52.43 |
| CDY21345 | Canola | cytosol | 41.44 | 51.86 |
| Bra031370.1-P | Field mustard | cytosol | 41.44 | 51.86 |
| PGSC0003DMT400024527 | Potato | cytosol | 40.94 | 50.0 |
| CDY12289 | Canola | cytosol | 26.05 | 49.76 |
| VIT_18s0001g05080.t01 | Wine grape | nucleus | 44.17 | 49.31 |
| KRH53100 | Soybean | cytosol | 33.0 | 48.54 |
| Solyc04g072810.2.1 | Tomato | cytosol | 39.21 | 48.47 |
| CDY38240 | Canola | peroxisome | 17.12 | 47.59 |
| KRH62380 | Soybean | cytosol | 32.01 | 47.08 |
| HORVU4Hr1G074380.1 | Barley | cytosol | 16.13 | 46.76 |
| HORVU4Hr1G005090.2 | Barley | cytosol | 14.64 | 45.38 |
| HORVU3Hr1G037050.3 | Barley | nucleus | 34.99 | 43.38 |
| HORVU6Hr1G021650.1 | Barley | cytosol, mitochondrion, nucleus | 14.89 | 43.17 |
| HORVU4Hr1G009210.2 | Barley | cytosol | 30.27 | 41.78 |
| KRH62383 | Soybean | cytosol | 35.48 | 41.69 |
| HORVU5Hr1G114590.3 | Barley | mitochondrion | 12.41 | 40.98 |
| HORVU4Hr1G009190.1 | Barley | cytosol | 29.28 | 40.41 |
| HORVU4Hr1G009310.1 | Barley | cytosol | 29.28 | 40.41 |
| HORVU3Hr1G080050.1 | Barley | cytosol, mitochondrion, plastid | 15.63 | 40.38 |
| HORVU5Hr1G020290.3 | Barley | plastid | 14.89 | 39.22 |
| HORVU7Hr1G021120.1 | Barley | cytosol | 27.3 | 39.01 |
| HORVU5Hr1G121940.5 | Barley | cytosol | 15.88 | 25.7 |
| HORVU0Hr1G022240.10 | Barley | mitochondrion | 15.63 | 24.05 |
| HORVU5Hr1G122080.1 | Barley | cytosol | 14.14 | 23.08 |
| HORVU5Hr1G121860.2 | Barley | plastid | 16.38 | 19.53 |
| HORVU3Hr1G096280.6 | Barley | plastid | 14.64 | 19.16 |
| HORVU3Hr1G096290.4 | Barley | plastid | 14.89 | 17.05 |
| HORVU4Hr1G067410.4 | Barley | plastid | 14.64 | 11.82 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G075070.1 | EnsemblPlantsGene:HORVU6Hr1G075070 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom |
| InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF202 | PFAM:PF00650 |
| PFAM:PF03765 | PFscan:PS50191 | SEG:seg | SMART:SM00516 | SMART:SM01100 | SUPFAM:SSF46938 |
| SUPFAM:SSF52087 | UniParc:UPI000294B60D | UniProt:M0XGI2 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chrchr6H:-:517937668..517942747
Molecular Weight (calculated)
44767.1 Da
IEP (calculated)
4.728
GRAVY (calculated)
-0.783
Length
403 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSGSGAVNG HAKEAALYEQ QLSKIGEVRA ALGQLSGKSA LYCSDGSIAR YLIARNWDVR KATKMLTKTL KWRSEYKPDE IRWDEISGEA MTGKIYRSDH
101: FDKSGRSILV MRPGCQNTKK SKGQIRYLVY CMENAILNLP AGQDQMVWLI DFAGFSLPNV SLLVTKLTAD VLQGHYPERL GVAILYNAPK FFESFWKMAS
201: PLLEPKTKNK VKFVYSDRPE TDKIMEDLFN MDELECAFGG RNPATFNIND YAARMREDDK KMPLFWSPEN SALATEPYRM KNHGSQQGDS GLKTEETASD
301: MIGETEAASE KSGETDTGSE KEDTEAASEE REETETSSEK MVETATESVK KEETDTVSEK KGETETESEK KEETETESST VKSTSSRGEG SASAEKSGSS
401: SDP
101: FDKSGRSILV MRPGCQNTKK SKGQIRYLVY CMENAILNLP AGQDQMVWLI DFAGFSLPNV SLLVTKLTAD VLQGHYPERL GVAILYNAPK FFESFWKMAS
201: PLLEPKTKNK VKFVYSDRPE TDKIMEDLFN MDELECAFGG RNPATFNIND YAARMREDDK KMPLFWSPEN SALATEPYRM KNHGSQQGDS GLKTEETASD
301: MIGETEAASE KSGETDTGSE KEDTEAASEE REETETSSEK MVETATESVK KEETDTVSEK KGETETESEK KEETETESST VKSTSSRGEG SASAEKSGSS
401: SDP
001: MNSDSNKSSS NGFEKSLTPE EYLNKINEVR TLLGPLTEKS SEFCSDAAIT RYLAARNGHV KKATKMLKET LKWRAQYKPE EIRWEEIARE AETGKIYRAN
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT
Arabidopsis Description
F16L1.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LM14]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.