Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES05517 | Sorghum | cytosol | 68.52 | 74.0 |
| Zm00001d052231_P003 | Maize | cytosol | 66.67 | 72.0 |
| HORVU6Hr1G075070.1 | Barley | nucleus | 75.4 | 70.72 |
| TraesCS6D01G281700.1 | Wheat | nucleus | 73.28 | 70.48 |
| TraesCS6A01G302200.1 | Wheat | nucleus | 75.13 | 70.47 |
| TraesCS6B01G331400.1 | Wheat | nucleus | 74.07 | 69.48 |
| CDY38239 | Canola | cytosol | 10.05 | 60.32 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 50.0 | 60.0 |
| Bra012311.1-P | Field mustard | cytosol | 45.5 | 56.39 |
| CDY56380 | Canola | cytosol | 45.5 | 56.39 |
| GSMUA_Achr3P04420_001 | Banana | cytosol | 49.47 | 55.99 |
| AT1G22180.4 | Thale cress | cytosol | 46.3 | 55.73 |
| CDY00428 | Canola | cytosol | 44.71 | 55.41 |
| KRH16691 | Soybean | cytosol | 47.62 | 54.22 |
| AT4G08690.2 | Thale cress | cytosol | 43.12 | 54.15 |
| KRH18888 | Soybean | cytosol | 47.62 | 54.05 |
| CDX90694 | Canola | cytosol | 43.12 | 52.75 |
| CDY21345 | Canola | cytosol | 44.71 | 52.48 |
| Bra031370.1-P | Field mustard | cytosol | 44.71 | 52.48 |
| Bra000655.1-P | Field mustard | cytosol | 42.59 | 52.1 |
| CDY05023 | Canola | cytosol | 43.12 | 51.91 |
| PGSC0003DMT400024527 | Potato | cytosol | 45.24 | 51.82 |
| Solyc04g072810.2.1 | Tomato | cytosol | 43.92 | 50.92 |
| VIT_18s0001g05080.t01 | Wine grape | nucleus | 47.35 | 49.58 |
| KRH53100 | Soybean | cytosol | 35.45 | 48.91 |
| CDY12289 | Canola | cytosol | 26.98 | 48.34 |
| CDY38240 | Canola | peroxisome | 18.52 | 48.28 |
| KRH62380 | Soybean | cytosol | 34.66 | 47.81 |
| Os01t0264700-01 | Rice | cytosol | 38.1 | 46.3 |
| KRH62383 | Soybean | cytosol | 39.42 | 43.44 |
| Os03t0724100-01 | Rice | cytosol | 32.54 | 41.14 |
| Os05t0267800-01 | Rice | cytosol | 28.84 | 38.52 |
| Os01t0926800-01 | Rice | cytosol, mitochondrion | 15.61 | 23.89 |
| Os03t0850700-01 | Rice | cytosol | 15.61 | 22.61 |
| Os02t0321500-01 | Rice | mitochondrion | 15.34 | 22.22 |
| Os03t0219100-01 | Rice | cytosol | 18.25 | 15.75 |
Protein Annotations
| Gene3D:3.40.525.10 | MapMan:35.2 | EntrezGene:4330749 | ProteinID:BAD15556.1 | ProteinID:BAD15655.1 | ProteinID:BAF10053.1 |
| ProteinID:BAS80955.1 | ProteinID:BAS80956.1 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom | InterPro:CRAL/TRIO_N_dom_sf |
| ncoils:Coil | ProteinID:EAZ24640.1 | InterPro:IPR001251 | InterPro:IPR036865 | EnsemblPlantsGene:Os02g0752000 | EnsemblPlants:Os02t0752000-01 |
| PFAM:PF00650 | PFscan:PS50191 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF202 | UniProt:Q6Z8I8 | SMART:SM00516 |
| SMART:SM01100 | SUPFAM:SSF46938 | SUPFAM:SSF52087 | UniParc:UPI0000358AB5 | RefSeq:XP_015627594.1 | RefSeq:XP_015627595.1 |
| SEG:seg | : | : | : | : | : |
Description
Cellular retinaldehyde-binding/triple function, C-terminal domain containing protein. (Os02t0752000-01);Similar to predicted protein. (Os02t0752000-02)
Coordinates
chr2:-:31604657..31608153
Molecular Weight (calculated)
42357.7 Da
IEP (calculated)
4.874
GRAVY (calculated)
-0.636
Length
378 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSASGVNNG DGKEAALFEQ RLSKIGEVRA ALGQLSGKAA LYCSDASIAR YLVARNWEVK KATKMLKKTL KWRSEYKPDE IRWDEIANEA ATGKIYRTDY
101: FDKSGRSILV MRPGVQNTKK AKGQIRYLVY CMENAILNLP HDQSQMVWLI DFAGFSLSNI SLHVTKLTAD VLQGHYPERL GVAILYNAPK FFESFWKIAS
201: PILEPKTFNK VKFVYPDRPE TNKIMEDLFN MEELESAFGG KNQATFNIND YAARMREDDI KMPLFWSPEN SALASEPYVM VNKDMAQEGS SGLKSEETAS
301: EKREETDTES ENREETESES ERAEIDSVSG KREETVAVSD KREEKETESE NGKAAVTSSN GVELTSLPGE GKGITPAD
101: FDKSGRSILV MRPGVQNTKK AKGQIRYLVY CMENAILNLP HDQSQMVWLI DFAGFSLSNI SLHVTKLTAD VLQGHYPERL GVAILYNAPK FFESFWKIAS
201: PILEPKTFNK VKFVYPDRPE TNKIMEDLFN MEELESAFGG KNQATFNIND YAARMREDDI KMPLFWSPEN SALASEPYVM VNKDMAQEGS SGLKSEETAS
301: EKREETDTES ENREETESES ERAEIDSVSG KREETVAVSD KREEKETESE NGKAAVTSSN GVELTSLPGE GKGITPAD
001: MNSDSNKSSS NGFEKSLTPE EYLNKINEVR TLLGPLTEKS SEFCSDAAIT RYLAARNGHV KKATKMLKET LKWRAQYKPE EIRWEEIARE AETGKIYRAN
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT
Arabidopsis Description
F16L1.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LM14]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.