Factsheet for Os05t0267800-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES17948	Sorghum	cytosol	60.42	63.33
HORVU7Hr1G021120.1	Barley	cytosol	62.54	62.77
TraesCS3D01G453300.2	Wheat	cytosol, mitochondrion, nucleus, plastid	60.78	61.65
TraesCS3B01G502500.1	Wheat	cytosol, nucleus, plastid	60.78	61.65
TraesCS4A01G395100.1	Wheat	cytosol	60.78	61.21
TraesCS7A01G094800.2	Wheat	cytosol	60.42	60.64
TraesCS3B01G500500.1	Wheat	cytosol, nucleus, plastid	59.36	60.22
TraesCS7D01G090800.1	Wheat	cytosol	60.07	60.07
KXG23351	Sorghum	cytosol	60.07	59.44
OQU79005	Sorghum	cytosol	60.07	57.24
Zm00001d010499_P001	Maize	plastid	57.6	56.79
Zm00001d037794_P001	Maize	cytosol, mitochondrion, nucleus, plastid	58.3	56.31
Os01t0264700-01	Rice	cytosol	45.23	41.16
GSMUA_Achr8P01630_001	Banana	cytosol	44.17	35.92
Os03t0724100-01	Rice	cytosol	34.98	33.11
GSMUA_Achr10P...	Banana	nucleus	44.17	32.81
Zm00001d019055_P001	Maize	cytosol	18.37	32.7
GSMUA_Achr9P17070_001	Banana	cytosol	46.29	31.64
Os02t0752000-01	Rice	cytosol	38.52	28.84
Os03t0850700-01	Rice	cytosol	19.43	21.07
Os01t0926800-01	Rice	cytosol, mitochondrion	18.37	21.05
Os02t0321500-01	Rice	mitochondrion	15.55	16.86
Os03t0219100-01	Rice	cytosol	21.2	13.7

Protein Annotations

Gene3D:3.40.525.10	MapMan:35.2	EntrezGene:4338247	ProteinID:AAV32170.1	EMBL:AK061207	ProteinID:BAF16961.1
ProteinID:BAS93068.1	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251
InterPro:IPR036865	EnsemblPlantsGene:Os05g0267800	EnsemblPlants:Os05t0267800-01	PFAM:PF00650	PFscan:PS50191	PANTHER:PTHR10174
PANTHER:PTHR10174:SF143	UniProt:Q5WMM0	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087
UniParc:UPI0000450924	RefSeq:XP_015640781.1	:	:	:	:

Description

Cellular retinaldehyde-binding/triple function, C-terminal domain containing protein. (Os05t0267800-01)

Coordinates

chr5:-:10672412..10675647

Molecular Weight (calculated)

32975.4 Da

IEP (calculated)

9.053

GRAVY (calculated)

-0.616

Length

283 amino acids

Sequence
(BLAST)

001: MSNLLKAKSW VPEEKAAATA SDEQNDKIKK VRELLGSQMT AEMPSFLSDA TIRRFLRARN WSTEQATKAL KETVKWRRQY RPDTIRWEDI PGREHEARRT
101: YIADYFDKNG RIVFISNPTI KSKSSTKDQI KQLVYNLEIF AMHSENMEDE CTVWLTDFQG WVLTNTPLPL LRECTHIIQN HYPGLISVAI LSNPPRIFES
201: FWKIVCYFIE PKLKEKVKFV YTNNPESHKI VADMFDLDKL ESAFGGRNTL PFDMDKYAER MKRSDQMRGA PMHANGYSCS TQT

Best Arabidopsis Sequence Match ( AT4G08690.2 )
(BLAST)

001: MNTNPVTNGF VKPVPTEEEQ AKIEEVRKLL GPLPEKLSSF CSDDAVLRYL RARNWHVKKA TKMLKETLKW RVQYKPEEIC WEEVAGEAET GKIYRSSCVD
101: KLGRPVLIMR PSVENSKSVK GQIRYLVYCM ENAVQNLPPG EEQMVWMIDF HGYSLANVSL RTTKETAHVL QEHYPERLAF AVLYNPPKFF EPFWKVARPF
201: LEPKTRNKVK FVYSDDPNTK VIMEENFDME KMELAFGGND DSGFNIEKHS ERMKEDDKKR LASLEGIVSA SLDSLSILSV SDGTASNSAH PSSHDVSEDE
301: H

Arabidopsis Description

AT4G08690 protein [Source:UniProtKB/TrEMBL;Acc:O22270]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.