Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER95261 | Sorghum | cytosol | 83.33 | 82.21 |
| Zm00001d048066_P001 | Maize | cytosol | 80.14 | 80.32 |
| Zm00001d028231_P003 | Maize | cytosol | 81.51 | 78.98 |
| TraesCS4D01G242900.1 | Wheat | cytosol | 78.08 | 76.17 |
| TraesCS4B01G243300.1 | Wheat | cytosol | 77.85 | 75.44 |
| TraesCS4A01G065900.1 | Wheat | cytosol | 78.77 | 75.16 |
| GSMUA_Achr3P29630_001 | Banana | cytosol | 67.81 | 69.39 |
| GSMUA_Achr6P25200_001 | Banana | cytosol | 66.21 | 68.08 |
| GSMUA_Achr7P27040_001 | Banana | cytosol | 67.35 | 67.82 |
| VIT_05s0020g03350.t01 | Wine grape | cytosol | 60.27 | 62.41 |
| GSMUA_Achr5P08620_001 | Banana | nucleus | 65.75 | 62.07 |
| HORVU4Hr1G067410.4 | Barley | plastid | 70.32 | 61.72 |
| KRG91288 | Soybean | cytosol | 55.25 | 59.9 |
| KRH35529 | Soybean | cytosol | 55.25 | 59.9 |
| PGSC0003DMT400077340 | Potato | cytosol | 57.31 | 59.34 |
| Solyc09g075970.2.1 | Tomato | cytosol | 57.08 | 59.1 |
| Bra032465.1-P | Field mustard | cytosol | 50.91 | 53.61 |
| AT1G05370.1 | Thale cress | cytosol | 50.91 | 53.48 |
| CDY59787 | Canola | cytosol | 50.68 | 53.37 |
| CDY10026 | Canola | cytosol | 50.46 | 53.12 |
| Bra039949.1-P | Field mustard | cytosol | 48.4 | 52.87 |
| CDY64658 | Canola | cytosol | 41.1 | 52.79 |
| Bra015421.1-P | Field mustard | cytosol | 47.49 | 51.74 |
| AT3G22410.1 | Thale cress | cytosol | 46.58 | 51.0 |
| Bra023828.1-P | Field mustard | nucleus | 45.43 | 49.14 |
| CDY10103 | Canola | extracellular | 29.22 | 47.58 |
| CDY71148 | Canola | cytosol, mitochondrion, nucleus, plastid | 34.02 | 46.86 |
| CDY38325 | Canola | cytosol | 39.5 | 46.63 |
| CDY10638 | Canola | nucleus | 33.79 | 39.36 |
| Os01t0926800-01 | Rice | cytosol, mitochondrion | 13.47 | 23.89 |
| Os03t0850700-01 | Rice | cytosol | 13.7 | 22.99 |
| Os03t0724100-01 | Rice | cytosol | 15.07 | 22.07 |
| Os01t0264700-01 | Rice | cytosol | 15.3 | 21.54 |
| Os05t0267800-01 | Rice | cytosol | 13.7 | 21.2 |
| Os02t0321500-01 | Rice | mitochondrion | 11.42 | 19.16 |
| Os02t0752000-01 | Rice | cytosol | 15.75 | 18.25 |
Protein Annotations
| Gene3D:3.40.525.10 | MapMan:35.2 | EntrezGene:4332081 | ProteinID:ABF94672.1 | ProteinID:BAF11312.1 | ProteinID:BAS82997.1 |
| InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | EnsemblPlantsGene:Os03g0219100 |
| EnsemblPlants:Os03t0219100-01 | PFAM:PF00650 | PFscan:PS50191 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF132 | UniProt:Q10PW5 |
| SMART:SM00516 | SUPFAM:SSF46938 | SUPFAM:SSF52087 | UniParc:UPI0000DB4CA4 | RefSeq:XP_015629188.1 | SEG:seg |
Description
Cellular retinaldehyde-binding/triple function, C-terminal domain containing protein. (Os03t0219100-01)
Coordinates
chr3:+:6264770..6267856
Molecular Weight (calculated)
48678.5 Da
IEP (calculated)
10.530
GRAVY (calculated)
-0.219
Length
438 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMEKVDAKE REKIEAVRKT LRKQAPLTAK QAMYCNDACV ERFLRARGES VKKAAKHLRT VLSWRDTIGA DHIIADEFSA ELADGVAYVA GHDDEARPVV
101: VFRIKQDYPK FHSQKSFVRL LVFTLEVAVS CMSRFVDQFV LLFDASFFRS ASAFLNLLMG TLKIVADYYP GRLHRAFVID PPSLFSVLWK GVRPFVELAP
201: ATAVVCSLDF EDSLEDASFT AYPRTASLRF EPAAALLATG TKGIGVGSAS SRFSVTVSHD NTLKPWYLST TTPSSVGPRS VVPTSSPSLI GASPLSARSF
301: SFASPAARST TTPPVHRGAP LTPFSTKGGQ KAPAPAQQFP RTPRPSFLQS PSMLFAFKKD GQASRGERER ESFLPFLRFY RRPYDEISYR AKMRPPLGGL
401: IAIVDEKSKQ HKTVQPPLRR HAGLHHQQLF QLHHHQRI
101: VFRIKQDYPK FHSQKSFVRL LVFTLEVAVS CMSRFVDQFV LLFDASFFRS ASAFLNLLMG TLKIVADYYP GRLHRAFVID PPSLFSVLWK GVRPFVELAP
201: ATAVVCSLDF EDSLEDASFT AYPRTASLRF EPAAALLATG TKGIGVGSAS SRFSVTVSHD NTLKPWYLST TTPSSVGPRS VVPTSSPSLI GASPLSARSF
301: SFASPAARST TTPPVHRGAP LTPFSTKGGQ KAPAPAQQFP RTPRPSFLQS PSMLFAFKKD GQASRGERER ESFLPFLRFY RRPYDEISYR AKMRPPLGGL
401: IAIVDEKSKQ HKTVQPPLRR HAGLHHQQLF QLHHHQRI
001: MGKKEQKDHH SVVESDDKVE AVLHLLRKHS PLTLKQEKFC NRACVGRFLR IKGDNVKKAA KQLRSCLSWR SSLGIESLIA DEFTAELAEG LAYVAGLDDE
101: CRPVLVFRIK QDYQKLHTQK QLTRLVVFTL EVAISTMSRN VEQFVILFDA SFFKSASAFM NILVTTLKIV AEYYPCRLFK TFVIDPPSLF SYLWKGIRTF
201: VDLSTATMIV SMQDFQDSFD YDDFSSSYPS RVSSLRFDTS SLKSTDKIGS CASSRFAFTV SRDGLDTVKP WCLTLTDTSS TKLGHNTGAY ISPLNARSFS
301: FASPAARSEP FGGPRRSFFA STPMPARTTD RHSIGTLRDP RIPRPSFFQS PAIFFRRESH VSKSEKPRDS FVQFLKFYRR PYDEMTYRSK MRPPLGGLVS
401: IVSTQIRRRH VSLSQRF
101: CRPVLVFRIK QDYQKLHTQK QLTRLVVFTL EVAISTMSRN VEQFVILFDA SFFKSASAFM NILVTTLKIV AEYYPCRLFK TFVIDPPSLF SYLWKGIRTF
201: VDLSTATMIV SMQDFQDSFD YDDFSSSYPS RVSSLRFDTS SLKSTDKIGS CASSRFAFTV SRDGLDTVKP WCLTLTDTSS TKLGHNTGAY ISPLNARSFS
301: FASPAARSEP FGGPRRSFFA STPMPARTTD RHSIGTLRDP RIPRPSFFQS PAIFFRRESH VSKSEKPRDS FVQFLKFYRR PYDEMTYRSK MRPPLGGLVS
401: IVSTQIRRRH VSLSQRF
Arabidopsis Description
Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:F4I8Q8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.