Factsheet for Zm00001d028231_P003

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95261	Sorghum	cytosol	90.93	92.57
Zm00001d048066_P001	Maize	cytosol	84.51	87.41
Os03t0219100-01	Rice	cytosol	78.98	81.51
TraesCS4D01G242900.1	Wheat	cytosol	72.79	73.27
TraesCS4B01G243300.1	Wheat	cytosol	73.01	73.01
TraesCS4A01G065900.1	Wheat	cytosol	73.23	72.11
GSMUA_Achr3P29630_001	Banana	cytosol	61.28	64.72
GSMUA_Achr7P27040_001	Banana	cytosol	61.28	63.68
GSMUA_Achr6P25200_001	Banana	cytosol	59.51	63.15
HORVU4Hr1G067410.4	Barley	plastid	67.04	60.72
VIT_05s0020g03350.t01	Wine grape	cytosol	56.19	60.05
GSMUA_Achr5P08620_001	Banana	nucleus	60.84	59.27
KRH35529	Soybean	cytosol	52.65	58.91
Solyc09g075970.2.1	Tomato	cytosol	55.09	58.87
PGSC0003DMT400077340	Potato	cytosol	55.09	58.87
KRG91288	Soybean	cytosol	51.99	58.17
Bra032465.1-P	Field mustard	cytosol	48.01	52.16
CDY59787	Canola	cytosol	47.79	51.92
CDY10026	Canola	cytosol	47.57	51.68
AT1G05370.1	Thale cress	cytosol	47.57	51.56
CDY64658	Canola	cytosol	38.5	51.03
Bra039949.1-P	Field mustard	cytosol	44.69	50.37
Bra015421.1-P	Field mustard	cytosol	44.69	50.25
AT3G22410.1	Thale cress	cytosol	43.58	49.25
CDY10103	Canola	extracellular	28.1	47.21
Bra023828.1-P	Field mustard	nucleus	42.04	46.91
CDY38325	Canola	cytosol	37.17	45.28
CDY71148	Canola	cytosol, mitochondrion, nucleus, plastid	31.86	45.28
CDY10638	Canola	nucleus	31.42	37.77
Zm00001d042274_P001	Maize	cytosol	12.83	23.11
Zm00001d042275_P001	Maize	cytosol	12.61	22.71
Zm00001d012847_P001	Maize	cytosol	13.72	22.46
Zm00001d033836_P001	Maize	nucleus	13.94	21.36
Zm00001d040360_P001	Maize	cytosol	14.82	21.2
Zm00001d037794_P001	Maize	cytosol, mitochondrion, nucleus, plastid	12.83	19.8
Zm00001d010499_P001	Maize	plastid	12.17	19.16
Zm00001d019055_P001	Maize	cytosol	6.42	18.24
Zm00001d052231_P003	Maize	cytosol	13.94	18.0
Zm00001d033837_P001	Maize	plastid	11.06	16.78
Zm00001d045573_P004	Maize	plastid	5.53	15.53
Zm00001d009968_P001	Maize	cytosol	9.96	14.42
Zm00001d034765_P001	Maize	cytosol	7.52	11.93
Zm00001d045574_P002	Maize	plastid	10.4	9.14

Protein Annotations

EnsemblPlants:Zm00001d028231_P003	EnsemblPlants:Zm00001d028231_T003	EnsemblPlantsGene:Zm00001d028231	EntrezGene:100279446	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom
InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR10174	PANTHER:PTHR10174:SF132
PFAM:PF00650	PFscan:PS50191	ProteinID:ONL95127.1	SEG:seg	SMART:SM00516	SUPFAM:SSF46938
SUPFAM:SSF52087	UniParc:UPI00084474BC	UniProt:A0A1D6JTD6	MapMan:35.2	:	:

Description

Sec14p-like phosphatidylinositol transfer family protein

Coordinates

chr1:+:27407335..27410561

Molecular Weight (calculated)

50259.4 Da

IEP (calculated)

10.543

GRAVY (calculated)

-0.256

Length

452 amino acids

Sequence
(BLAST)

001: MAIDKVDAKE REKIEAVRKL LCKQAPLSAK QAQYCNDACL ERFLRSRGDS VKKAAKHLRT VLSWRESVGA DHIMADEFSA ELADGVAFVS GHDDDGRPVV
101: VFRIKQDYPK FHSQKSFVRL LVFTLEVAVA CMSRFVDQFV VLFDASKPPI LVTVRTDTKH SFFRSASAFL NLLMGTLKIV ADYYPGRLHR AFVIDPPSLF
201: SVLWKGVRPF VELAPATAVV CSLDFEDSLE DASFTAYPRT ASLRFEPAAV VGKNPGVGSV SSRFSVTPTD NPIKPWYLST IPTSVGSRSV VPTSSSPSLV
301: GASPLSARSF SFASPATLRS TVATPPPFPR GAGAPLTPSS AAKAQKTPPQ PQQFPRTPRP SFLQSPSMLF AFRKDGQASR VERERESFLP YLRFYRRPYD
401: EISYRAKMRP PLGGLISIVG DKFRQKPVPQ PQPLRRHAGL HHQHHYQQQQ RI

Best Arabidopsis Sequence Match ( AT1G05370.1 )
(BLAST)

001: MGKKEQKDHH SVVESDDKVE AVLHLLRKHS PLTLKQEKFC NRACVGRFLR IKGDNVKKAA KQLRSCLSWR SSLGIESLIA DEFTAELAEG LAYVAGLDDE
101: CRPVLVFRIK QDYQKLHTQK QLTRLVVFTL EVAISTMSRN VEQFVILFDA SFFKSASAFM NILVTTLKIV AEYYPCRLFK TFVIDPPSLF SYLWKGIRTF
201: VDLSTATMIV SMQDFQDSFD YDDFSSSYPS RVSSLRFDTS SLKSTDKIGS CASSRFAFTV SRDGLDTVKP WCLTLTDTSS TKLGHNTGAY ISPLNARSFS
301: FASPAARSEP FGGPRRSFFA STPMPARTTD RHSIGTLRDP RIPRPSFFQS PAIFFRRESH VSKSEKPRDS FVQFLKFYRR PYDEMTYRSK MRPPLGGLVS
401: IVSTQIRRRH VSLSQRF

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:F4I8Q8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.