Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- plastid 1
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
OQU79005 | Sorghum | cytosol | 79.86 | 78.79 |
TraesCS3B01G502500.1 | Wheat | cytosol, nucleus, plastid | 55.63 | 58.42 |
Os05t0267800-01 | Rice | cytosol | 56.31 | 58.3 |
TraesCS3B01G500500.1 | Wheat | cytosol, nucleus, plastid | 54.95 | 57.71 |
TraesCS3D01G453300.2 | Wheat | cytosol, mitochondrion, nucleus, plastid | 54.95 | 57.71 |
TraesCS4A01G395100.1 | Wheat | cytosol | 54.95 | 57.3 |
HORVU7Hr1G021120.1 | Barley | cytosol | 54.95 | 57.09 |
TraesCS7D01G090800.1 | Wheat | cytosol | 54.61 | 56.54 |
TraesCS7A01G094800.2 | Wheat | cytosol | 53.58 | 55.67 |
Zm00001d010499_P001 | Maize | plastid | 49.49 | 50.52 |
Zm00001d040360_P001 | Maize | cytosol | 39.59 | 36.71 |
GSMUA_Achr8P01630_001 | Banana | cytosol | 43.0 | 36.21 |
GSMUA_Achr10P... | Banana | nucleus | 43.69 | 33.6 |
Zm00001d019055_P001 | Maize | cytosol | 17.75 | 32.7 |
GSMUA_Achr9P17070_001 | Banana | cytosol | 45.05 | 31.88 |
Zm00001d033836_P001 | Maize | nucleus | 31.4 | 31.19 |
Zm00001d052231_P003 | Maize | cytosol | 35.49 | 29.71 |
Zm00001d042275_P001 | Maize | cytosol | 20.82 | 24.3 |
Zm00001d033837_P001 | Maize | plastid | 24.57 | 24.16 |
Zm00001d042274_P001 | Maize | cytosol | 19.11 | 22.31 |
Zm00001d012847_P001 | Maize | cytosol | 19.45 | 20.65 |
Zm00001d045573_P004 | Maize | plastid | 8.19 | 14.91 |
Zm00001d048066_P001 | Maize | cytosol | 20.48 | 13.73 |
Zm00001d028231_P003 | Maize | cytosol | 19.8 | 12.83 |
Zm00001d009968_P001 | Maize | cytosol | 12.29 | 11.54 |
Zm00001d045574_P002 | Maize | plastid | 17.06 | 9.73 |
Zm00001d034765_P001 | Maize | cytosol | 8.19 | 8.42 |
Protein Annotations
EMBL:BT068611 | EnsemblPlants:Zm00001d037794_P001 | EnsemblPlants:Zm00001d037794_T001 | EnsemblPlantsGene:Zm00001d037794 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom |
InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF143 |
PFAM:PF00650 | PFscan:PS50191 | ProteinID:AQK84815.1 | SEG:seg | SMART:SM00516 | SUPFAM:SSF46938 |
SUPFAM:SSF52087 | UniParc:UPI000195CFC3 | UniProt:C0PJZ2 | MapMan:35.2 | : | : |
Description
Sec14p-like phosphatidylinositol transfer family protein
Coordinates
chr6:-:137924110..137933384
Molecular Weight (calculated)
34102.5 Da
IEP (calculated)
9.166
GRAVY (calculated)
-0.635
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: MAYLLKSRSK PVQQLLVPAS SEEQQRRVNE VRELLGDLPT EMPNFLSDAT IRRFLRARNW STMKATKSLK EATSWRRQYK PEKIRWESIA DSENEARRAY
101: IPDYLDKKGR MVFVTLPTIK SKSSEKDHLK YLVYNLENLL IDCADAEEDN VVWISDFKGW SISSTPFSLT RQSLHIIQQY YPGLIAVGIL TNAPKIFESF
201: WKIMKHFLEP KMDEKVKFVY NDSSESQKIL GDMFDLDELE HIFGGRNTAD FDINVYAERM KRRDRIRGAS TEDNGEATSS RCWTKTTRNS SSV
101: IPDYLDKKGR MVFVTLPTIK SKSSEKDHLK YLVYNLENLL IDCADAEEDN VVWISDFKGW SISSTPFSLT RQSLHIIQQY YPGLIAVGIL TNAPKIFESF
201: WKIMKHFLEP KMDEKVKFVY NDSSESQKIL GDMFDLDELE HIFGGRNTAD FDINVYAERM KRRDRIRGAS TEDNGEATSS RCWTKTTRNS SSV
001: MNSDSNKSSS NGFEKSLTPE EYLNKINEVR TLLGPLTEKS SEFCSDAAIT RYLAARNGHV KKATKMLKET LKWRAQYKPE EIRWEEIARE AETGKIYRAN
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT
Arabidopsis Description
F16L1.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LM14]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.