Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d034765_P001 | Maize | cytosol | 73.72 | 80.7 |
| Zm00001d042274_P001 | Maize | cytosol | 41.99 | 52.19 |
| EES02004 | Sorghum | cytosol | 38.14 | 48.37 |
| Zm00001d042275_P001 | Maize | cytosol | 33.97 | 42.23 |
| TraesCS3B01G475100.1 | Wheat | cytosol | 32.05 | 41.84 |
| TraesCS3D01G433800.1 | Wheat | cytosol | 31.41 | 40.83 |
| TraesCS3A01G440900.1 | Wheat | cytosol | 32.05 | 40.65 |
| TraesCS3A01G441100.2 | Wheat | cytosol | 31.09 | 40.42 |
| TraesCS3B01G475000.1 | Wheat | cytosol | 31.73 | 40.24 |
| TraesCS3D01G433700.1 | Wheat | cytosol | 32.05 | 40.16 |
| Os01t0926800-01 | Rice | cytosol, mitochondrion | 31.73 | 40.08 |
| TraesCS3A01G441000.1 | Wheat | cytosol | 29.81 | 38.11 |
| KRH41051 | Soybean | cytosol | 27.56 | 34.68 |
| Bra032645.1-P | Field mustard | cytosol | 25.0 | 33.77 |
| VIT_17s0000g00130.t01 | Wine grape | cytosol | 26.92 | 32.81 |
| GSMUA_Achr4P15920_001 | Banana | cytosol | 27.24 | 32.32 |
| CDX90047 | Canola | cytosol | 26.28 | 32.16 |
| Bra033247.1-P | Field mustard | cytosol | 26.28 | 32.16 |
| AT1G01630.1 | Thale cress | cytosol | 26.28 | 32.16 |
| HORVU3Hr1G096280.6 | Barley | plastid | 31.73 | 32.14 |
| CDY15164 | Canola | cytosol | 25.64 | 31.37 |
| CDY38020 | Canola | cytosol | 25.64 | 30.53 |
| VIT_01s0150g00170.t01 | Wine grape | cytosol | 24.04 | 30.49 |
| KRH54081 | Soybean | cytosol | 25.0 | 29.43 |
| KRH59732 | Soybean | endoplasmic reticulum, golgi | 26.92 | 29.37 |
| KRH63881 | Soybean | cytosol | 24.04 | 28.41 |
| Zm00001d012847_P001 | Maize | cytosol | 25.0 | 28.26 |
| HORVU3Hr1G096290.4 | Barley | plastid | 31.09 | 27.56 |
| Solyc03g118150.2.1 | Tomato | cytosol | 23.4 | 26.94 |
| PGSC0003DMT400036745 | Potato | cytosol | 22.76 | 26.2 |
| Solyc06g068800.2.1 | Tomato | cytosol | 22.76 | 22.98 |
| PGSC0003DMT400065724 | Potato | cytosol | 22.44 | 22.65 |
| Zm00001d040360_P001 | Maize | cytosol | 14.1 | 13.92 |
| Zm00001d045573_P004 | Maize | plastid | 7.05 | 13.66 |
| Zm00001d010499_P001 | Maize | plastid | 12.5 | 13.59 |
| Zm00001d033836_P001 | Maize | nucleus | 12.18 | 12.88 |
| Zm00001d037794_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 11.54 | 12.29 |
| Zm00001d052231_P003 | Maize | cytosol | 12.18 | 10.86 |
| Zm00001d033837_P001 | Maize | plastid | 10.26 | 10.74 |
| Zm00001d019055_P001 | Maize | cytosol | 5.45 | 10.69 |
| Zm00001d028231_P003 | Maize | cytosol | 14.42 | 9.96 |
| Zm00001d048066_P001 | Maize | cytosol | 13.46 | 9.61 |
| Zm00001d045574_P002 | Maize | plastid | 14.42 | 8.75 |
Protein Annotations
| Gene3D:3.40.525.10 | MapMan:35.2 | UniProt:A0A1D6FNE0 | ProteinID:AQK93173.1 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf |
| InterPro:CRAL/TRIO_N_dom | InterPro:CRAL/TRIO_N_dom_sf | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR001251 |
| InterPro:IPR036865 | PFAM:PF00650 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF158 | SMART:SM01100 | SUPFAM:SSF46938 |
| SUPFAM:SSF52087 | TMHMM:TMhelix | UniParc:UPI0008442E64 | EnsemblPlantsGene:Zm00001d009968 | EnsemblPlants:Zm00001d009968_P001 | EnsemblPlants:Zm00001d009968_T001 |
| SEG:seg | : | : | : | : | : |
Description
Sec14p-like phosphatidylinositol transfer family protein
Coordinates
chr8:-:92810217..92814940
Molecular Weight (calculated)
35342.0 Da
IEP (calculated)
5.331
GRAVY (calculated)
-0.364
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: MQAVDNLTLR RFLRARDHDV DKASAMFLKF LKWRREAAPG GSVPEEQVRR ELSQDKLCMG GVDRAGRPIL VAFAARHFSA GHDMAEFKSF VVYFFDKICA
101: RIPRGQEKFL CIVDLKGWEI LVFLQVNKVH TKKAAAPKIA KQESSDDDTS DETFESDEEP AKKPVAKPLA AVAKNGSKTV KQESSSDEDS SEDESDDDSD
201: DGSDIVFNLL NRVYDDVGKR WSRFSSLGLR GLPGIKVNDS IMLFVLCLWL SMAFNTNYEI VFLIISGMMR TIWSPNRSTD DYRNKDEVSV LTEEFKTQLT
301: IREDLFITTK VV
101: RIPRGQEKFL CIVDLKGWEI LVFLQVNKVH TKKAAAPKIA KQESSDDDTS DETFESDEEP AKKPVAKPLA AVAKNGSKTV KQESSSDEDS SEDESDDDSD
201: DGSDIVFNLL NRVYDDVGKR WSRFSSLGLR GLPGIKVNDS IMLFVLCLWL SMAFNTNYEI VFLIISGMMR TIWSPNRSTD DYRNKDEVSV LTEEFKTQLT
301: IREDLFITTK VV
001: MENKETKQEP AAAAEQKTVP LIEDEIERSK VGIMRALCDR QDPETKEVDD LMIRRFLRAR DLDIEKASTM FLNYLTWKRS MLPKGHIPEA EIANDLSHNK
101: MCMQGHDKMG RPIAVAIGNR HNPSKGNPDE FKRFVVYTLE KICARMPRGQ EKFVAIGDLQ GWGYSNCDIR GYLAALSTLQ DCYPERLGKL YIVHAPYIFM
201: TAWKVIYPFI DANTKKKIVF VENKKLTPTL LEDIDESQLP DIYGGKLPLV PIQET
101: MCMQGHDKMG RPIAVAIGNR HNPSKGNPDE FKRFVVYTLE KICARMPRGQ EKFVAIGDLQ GWGYSNCDIR GYLAALSTLQ DCYPERLGKL YIVHAPYIFM
201: TAWKVIYPFI DANTKKKIVF VENKKLTPTL LEDIDESQLP DIYGGKLPLV PIQET
Arabidopsis Description
Polyphosphoinositide binding protein, putative [Source:UniProtKB/TrEMBL;Acc:Q9LQ96]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.