Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d029847_P001 | |
| Zm00001d043365_P001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G68060.1 | Zm00001d029847_P001 | AT2G45920.1 | 21798944 |
| AT1G68060.1 | Zm00001d043365_P001 | AT5G61010.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER89530 | Sorghum | nucleus | 96.2 | 96.2 |
| Zm00001d037291_P001 | Maize | nucleus | 94.22 | 94.22 |
| Os06t0251700-01 | Rice | nucleus | 86.96 | 86.68 |
| TraesCS7B01G107500.1 | Wheat | nucleus | 86.47 | 86.33 |
| TraesCS7A01G200700.1 | Wheat | nucleus | 86.47 | 86.33 |
| TraesCS7D01G204000.1 | Wheat | nucleus | 86.14 | 86.0 |
| HORVU7Hr1G041170.1 | Barley | nucleus | 85.81 | 83.87 |
| Zm00001d017961_P003 | Maize | cytosol | 75.74 | 77.8 |
| KRH49658 | Soybean | cytosol | 73.27 | 72.67 |
| KRH70354 | Soybean | endoplasmic reticulum | 72.77 | 72.06 |
| KRH41720 | Soybean | cytosol | 71.78 | 70.62 |
| KRH60419 | Soybean | cytosol, plastid | 71.62 | 70.45 |
| VIT_01s0011g05790.t01 | Wine grape | cytosol | 73.27 | 69.7 |
| Solyc01g005330.2.1 | Tomato | cytosol | 71.12 | 69.29 |
| PGSC0003DMT400051425 | Potato | cytosol, nucleus, plasma membrane | 71.12 | 69.07 |
| Solyc04g008040.2.1 | Tomato | nucleus | 70.3 | 69.04 |
| PGSC0003DMT400075913 | Potato | cytosol | 70.3 | 69.04 |
| PGSC0003DMT400056068 | Potato | cytosol | 70.79 | 68.97 |
| Solyc05g017980.2.1 | Tomato | cytosol | 70.63 | 68.81 |
| CDY04200 | Canola | plastid | 68.15 | 66.94 |
| AT1G14840.1 | Thale cress | plastid | 66.34 | 66.56 |
| Bra004279.1-P | Field mustard | nucleus, plastid | 68.48 | 66.4 |
| CDX96050 | Canola | nucleus, plastid | 68.48 | 66.4 |
| Bra004053.1-P | Field mustard | nucleus, plastid | 67.49 | 66.18 |
| CDY07403 | Canola | nucleus, plastid | 67.49 | 66.18 |
| AT1G68060.1 | Thale cress | nucleus, plastid | 67.82 | 66.08 |
| CDX84971 | Canola | cytosol | 67.0 | 66.02 |
| CDY01879 | Canola | nucleus | 67.82 | 65.87 |
| CDY40783 | Canola | plastid | 66.5 | 65.74 |
| Bra026800.1-P | Field mustard | nucleus | 64.85 | 65.39 |
| CDY27573 | Canola | nucleus, plastid | 67.33 | 65.18 |
| Bra012493.1-P | Field mustard | nucleus | 65.68 | 64.93 |
| CDX81676 | Canola | plastid | 63.37 | 64.86 |
| Bra010978.1-P | Field mustard | nucleus | 65.35 | 64.81 |
| Bra025859.1-P | Field mustard | nucleus | 48.35 | 64.68 |
| Bra026184.1-P | Field mustard | nucleus | 63.53 | 64.6 |
| CDY03865 | Canola | nucleus | 65.51 | 64.45 |
| CDY45293 | Canola | nucleus | 63.7 | 64.23 |
| CDY33736 | Canola | nucleus | 64.03 | 64.13 |
| CDY51769 | Canola | nucleus | 63.7 | 64.12 |
| CDY36126 | Canola | nucleus | 65.02 | 63.86 |
| Bra024854.1-P | Field mustard | nucleus, plastid | 66.34 | 63.81 |
| Bra032784.1-P | Field mustard | nucleus | 62.54 | 63.59 |
| CDY36256 | Canola | nucleus, plastid | 65.02 | 63.34 |
| AT2G01750.2 | Thale cress | nucleus | 65.84 | 63.33 |
| CDY17639 | Canola | nucleus, plastid | 65.02 | 63.24 |
| AT1G24764.3 | Thale cress | endoplasmic reticulum, extracellular | 68.15 | 59.6 |
| CDY24415 | Canola | nucleus | 21.45 | 50.98 |
| Zm00001d028219_P001 | Maize | cytosol | 34.49 | 40.9 |
Protein Annotations
| EMBL:BT060836 | EnsemblPlants:Zm00001d044724_P001 | EnsemblPlants:Zm00001d044724_T001 | EnsemblPlantsGene:Zm00001d044724 | EntrezGene:100304320 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0007010 | GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016043 | InterPro:MAP70 | ncoils:Coil | PANTHER:PTHR31246 | PANTHER:PTHR31246:SF4 | PFAM:PF07058 |
| ProteinID:AQL00734.1 | SEG:seg | UniParc:UPI000194878B | UniProt:C0HET0 | MapMan:35.1 | : |
Description
Microtubule-associated protein 70-1
Coordinates
chr9:-:324619..337752
Molecular Weight (calculated)
67945.5 Da
IEP (calculated)
9.181
GRAVY (calculated)
-0.844
Length
606 amino acids
Sequence
(BLAST)
(BLAST)
001: MTDGGEDGNA AAPRAPSRRR GPVRASLDAD EFMALMHGSD PVRVELTRLE NELRDKEREL GEAQTEIRAL RLSERAREKA VEELTDELEK MAEKLKLTES
101: LLESKNLEVK KINDERKAAL AAQFAAEATL RRVHAAQKDD DMPPIEAILA PLEAELKLSR QEIANLQDDN RALDRLTKQK EAALLEAERT VQIAMAKAAM
201: VDDLQNKNQE LIKQIEICHE ENKILDKLHR QKIAEVEKLS QTVRELEEAV LQGGATANVV RDYQRRFQEI NEEKRTLDRE LARAKVTANR VASVVANEWK
301: DSNDKVMPVK QWLEERRFLQ GEMQQLRDKL AVAERTARSE AQLKEKYQLR LKVLEDGLRG PPSGSSRPTT EGKSFSNGPS RRLSLGGADN ISKLSPNGLL
401: SRRSPSFHSR SSLLSNSSLV LKHAKGTSKS FDGGTRSLDR GKIHGSGAHL LNRSTDAVRD KETSDSWKGD MDERTNERAD NNTDEKSNET TNKNSAETVS
501: GFLYDMLQKE VISLRKSCHE KDQILKDKDD AIEMLAKKVD TLTKAMEVEA RKVRREVAAM EKEVAAMRAS KEQETRAKLL GTKGSGSSQL LPGRNAARTG
601: SMRNFQ
101: LLESKNLEVK KINDERKAAL AAQFAAEATL RRVHAAQKDD DMPPIEAILA PLEAELKLSR QEIANLQDDN RALDRLTKQK EAALLEAERT VQIAMAKAAM
201: VDDLQNKNQE LIKQIEICHE ENKILDKLHR QKIAEVEKLS QTVRELEEAV LQGGATANVV RDYQRRFQEI NEEKRTLDRE LARAKVTANR VASVVANEWK
301: DSNDKVMPVK QWLEERRFLQ GEMQQLRDKL AVAERTARSE AQLKEKYQLR LKVLEDGLRG PPSGSSRPTT EGKSFSNGPS RRLSLGGADN ISKLSPNGLL
401: SRRSPSFHSR SSLLSNSSLV LKHAKGTSKS FDGGTRSLDR GKIHGSGAHL LNRSTDAVRD KETSDSWKGD MDERTNERAD NNTDEKSNET TNKNSAETVS
501: GFLYDMLQKE VISLRKSCHE KDQILKDKDD AIEMLAKKVD TLTKAMEVEA RKVRREVAAM EKEVAAMRAS KEQETRAKLL GTKGSGSSQL LPGRNAARTG
601: SMRNFQ
001: MSDVSGDGDL SATVTEHEVT PQPPVSSATY PSLTVSASYK ESSGGKSSSK RRPIRPSFDA AADNEFITLL HGSDPVKVEL NRLENEVRDK DRELGEANAE
101: IKALRLSERQ REKAVEELTE ELTKLDEKLK LTESILESKN LEIKKINEEK KASMAAQFAA EATLRRVHAA QKDDDMPPIE AILAPLEAEL KLARSEIGKL
201: QEDNRALDRL TKSKEAALLE AERTVEAAMA KAAMVDDLQN KNQELMKQIE ICQEENKILD RMHRQKVAEV EKLTQTVREL EEAVLAGGAA ANAVRDYQRK
301: FQEMNEERKT LDRELARAKV TANRVATVVA NEWKDGNDKV MPVKQWLEER RFLQGEMQQL RDKLAITDRA AKSEAQLKEK FQLRLKVLEE TLRGTSSSAT
401: RNTPEARSMS NGPSRRQSLG GAENLQKFTS NGALSKKAPA SQMRHSLSIN STSVLKNAKG TSKSFDGGTR SVDRGKALLN GPGNYSFNKA TDDSKEAESG
501: NGWKENSEEK PQSEDPEAAT EDSVPGVLYD LLQKEVVSLR KASNEKDQSL KDKDDAIEML AKKVETLTKA MEVEAKKMRR EVAAMEKEVA AMRVEKDQDA
601: RAKRFSNSKS PSNTAQILAG RAAGRSGGLT KSTQ
101: IKALRLSERQ REKAVEELTE ELTKLDEKLK LTESILESKN LEIKKINEEK KASMAAQFAA EATLRRVHAA QKDDDMPPIE AILAPLEAEL KLARSEIGKL
201: QEDNRALDRL TKSKEAALLE AERTVEAAMA KAAMVDDLQN KNQELMKQIE ICQEENKILD RMHRQKVAEV EKLTQTVREL EEAVLAGGAA ANAVRDYQRK
301: FQEMNEERKT LDRELARAKV TANRVATVVA NEWKDGNDKV MPVKQWLEER RFLQGEMQQL RDKLAITDRA AKSEAQLKEK FQLRLKVLEE TLRGTSSSAT
401: RNTPEARSMS NGPSRRQSLG GAENLQKFTS NGALSKKAPA SQMRHSLSIN STSVLKNAKG TSKSFDGGTR SVDRGKALLN GPGNYSFNKA TDDSKEAESG
501: NGWKENSEEK PQSEDPEAAT EDSVPGVLYD LLQKEVVSLR KASNEKDQSL KDKDDAIEML AKKVETLTKA MEVEAKKMRR EVAAMEKEVA AMRVEKDQDA
601: RAKRFSNSKS PSNTAQILAG RAAGRSGGLT KSTQ
Arabidopsis Description
ATMAP70-2microtubule-associated proteins 70-2 [Source:TAIR;Acc:AT1G24764]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.