Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER95273 | Sorghum | cytosol | 85.71 | 85.71 |
| Os03t0215700-01 | Rice | cytosol | 62.82 | 62.33 |
| TraesCS4A01G078900.2 | Wheat | nucleus | 63.6 | 61.21 |
| TraesCS4D01G244000.1 | Wheat | nucleus | 62.23 | 59.89 |
| HORVU4Hr1G067630.12 | Barley | nucleus | 60.67 | 59.05 |
| TraesCS4B01G245400.1 | Wheat | nucleus | 60.27 | 58.0 |
| PGSC0003DMT400034592 | Potato | cytosol | 29.35 | 57.03 |
| Solyc04g015010.2.1 | Tomato | cytosol | 41.68 | 43.74 |
| GSMUA_Achr7P26720_001 | Banana | cytosol | 42.86 | 42.52 |
| PGSC0003DMT400038827 | Potato | cytosol | 41.49 | 41.98 |
| CDY42967 | Canola | cytosol, nucleus, plasma membrane | 37.77 | 38.6 |
| Solyc11g012660.1.1 | Tomato | nucleus | 42.07 | 38.39 |
| Bra026236.1-P | Field mustard | cytosol | 37.18 | 38.23 |
| VIT_00s0194g00260.t01 | Wine grape | cytosol | 43.64 | 38.18 |
| CDY35590 | Canola | cytosol | 38.16 | 37.94 |
| KRH51187 | Soybean | cytosol | 42.47 | 37.87 |
| KRH11576 | Soybean | cytosol | 41.68 | 37.3 |
| AT4G17220.1 | Thale cress | cytosol | 37.38 | 37.23 |
| CDY09638 | Canola | cytosol | 36.59 | 37.18 |
| CDX90483 | Canola | cytosol | 36.4 | 36.98 |
| KRH36588 | Soybean | cytosol | 40.7 | 36.43 |
| KRH01966 | Soybean | mitochondrion | 39.92 | 36.17 |
| Zm00001d044724_P001 | Maize | cytosol | 40.9 | 34.49 |
| Zm00001d017961_P003 | Maize | cytosol | 39.73 | 34.41 |
| Zm00001d037291_P001 | Maize | nucleus | 40.7 | 34.32 |
Protein Annotations
| EnsemblPlants:Zm00001d028219_P001 | EnsemblPlants:Zm00001d028219_T001 | EnsemblPlantsGene:Zm00001d028219 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0007010 | GO:GO:0007275 | GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009832 | GO:GO:0009987 |
| GO:GO:0010051 | GO:GO:0016043 | InterPro:MAP70 | ncoils:Coil | PANTHER:PTHR31246 | PANTHER:PTHR31246:SF5 |
| PFAM:PF07058 | ProteinID:ONL95097.1 | UniParc:UPI00022145AC | UniProt:A0A1D6JTA0 | MapMan:35.1 | : |
Description
ATMAP70-2
Coordinates
chr1:+:26903676..26908356
Molecular Weight (calculated)
58569.7 Da
IEP (calculated)
9.773
GRAVY (calculated)
-0.960
Length
511 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSLGEVGDG KEIFHGHGHS DPVVDELNRL QNLLREKERE LGHAYSEIKG LKVTEALKDK AIAELSKELK RQDERMRSME KQLEQKNLEV KRLNNERKEA
101: LSAQFAAEAT LRRIHSSQKD EESVPFDAII APLESDIRKY RHEIAVLQDD KKALERHLKL KEVALVEAGN ILHTALERAL IVEDVQNQNI ELKKHMEIYH
201: EENKLLEKAN RQKVLEVEKL TQTINELEES ILATGEVANV VHFYQNQATK LNEEKRTLER ELARAKVYVN RVASTAANEW KDDSDKLMPV KRWLEERRLL
301: QGEIQRLRDR ITVAEKSAKI EAQLNDKLKR RLKSLEEDMR NKTSNSSTKE INKQATPKRS LSQPKQPKTM RVLPQLYSPE VVDKRRPISQ PRASMVGKVL
401: KQPNSEIEPT KKSTVVKRFD SPGRRTISSK EECPMKNQLW ASKTKTDVIV GKENKVQKPN SKARLNASHS QGHVDTKVFD GNDEYGLQNS EHHEAMANER
501: NGNSSSDESS P
101: LSAQFAAEAT LRRIHSSQKD EESVPFDAII APLESDIRKY RHEIAVLQDD KKALERHLKL KEVALVEAGN ILHTALERAL IVEDVQNQNI ELKKHMEIYH
201: EENKLLEKAN RQKVLEVEKL TQTINELEES ILATGEVANV VHFYQNQATK LNEEKRTLER ELARAKVYVN RVASTAANEW KDDSDKLMPV KRWLEERRLL
301: QGEIQRLRDR ITVAEKSAKI EAQLNDKLKR RLKSLEEDMR NKTSNSSTKE INKQATPKRS LSQPKQPKTM RVLPQLYSPE VVDKRRPISQ PRASMVGKVL
401: KQPNSEIEPT KKSTVVKRFD SPGRRTISSK EECPMKNQLW ASKTKTDVIV GKENKVQKPN SKARLNASHS QGHVDTKVFD GNDEYGLQNS EHHEAMANER
501: NGNSSSDESS P
001: MSDVSGDGDL SATVTEHEVT PQPPVSSATY PSLTVSASYK ESSGGKSSSK RRPIRPSFDA AADNEFITLL HGSDPVKVEL NRLENEVRDK DRELGEANAE
101: IKALRLSERQ REKAVEELTE ELTKLDEKLK LTESILESKN LEIKKINEEK KASMAAQFAA EATLRRVHAA QKDDDMPPIE AILAPLEAEL KLARSEIGKL
201: QEDNRALDRL TKSKEAALLE AERTVEAAMA KAAMVDDLQN KNQELMKQIE ICQEENKILD RMHRQKVAEV EKLTQTVREL EEAVLAGGAA ANAVRDYQRK
301: FQEMNEERKT LDRELARAKV TANRVATVVA NEWKDGNDKV MPVKQWLEER RFLQGEMQQL RDKLAITDRA AKSEAQLKEK FQLRLKVLEE TLRGTSSSAT
401: RNTPEARSMS NGPSRRQSLG GAENLQKFTS NGALSKKAPA SQMRHSLSIN STSVLKNAKG TSKSFDGGTR SVDRGKALLN GPGNYSFNKA TDDSKEAESG
501: NGWKENSEEK PQSEDPEAAT EDSVPGVLYD LLQKEVVSLR KASNEKDQSL KDKDDAIEML AKKVETLTKA MEVEAKKMRR EVAAMEKEVA AMRVEKDQDA
601: RAKRFSNSKS PSNTAQILAG RAAGRSGGLT KSTQ
101: IKALRLSERQ REKAVEELTE ELTKLDEKLK LTESILESKN LEIKKINEEK KASMAAQFAA EATLRRVHAA QKDDDMPPIE AILAPLEAEL KLARSEIGKL
201: QEDNRALDRL TKSKEAALLE AERTVEAAMA KAAMVDDLQN KNQELMKQIE ICQEENKILD RMHRQKVAEV EKLTQTVREL EEAVLAGGAA ANAVRDYQRK
301: FQEMNEERKT LDRELARAKV TANRVATVVA NEWKDGNDKV MPVKQWLEER RFLQGEMQQL RDKLAITDRA AKSEAQLKEK FQLRLKVLEE TLRGTSSSAT
401: RNTPEARSMS NGPSRRQSLG GAENLQKFTS NGALSKKAPA SQMRHSLSIN STSVLKNAKG TSKSFDGGTR SVDRGKALLN GPGNYSFNKA TDDSKEAESG
501: NGWKENSEEK PQSEDPEAAT EDSVPGVLYD LLQKEVVSLR KASNEKDQSL KDKDDAIEML AKKVETLTKA MEVEAKKMRR EVAAMEKEVA AMRVEKDQDA
601: RAKRFSNSKS PSNTAQILAG RAAGRSGGLT KSTQ
Arabidopsis Description
ATMAP70-2microtubule-associated proteins 70-2 [Source:TAIR;Acc:AT1G24764]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.