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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:nucleus
mitochondrion: 28499913
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
PPI
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH51187 Soybean cytosol 74.29 73.12
KRH36588 Soybean cytosol 69.15 68.3
KRH11576 Soybean cytosol 68.79 67.95
PGSC0003DMT400034592 Potato cytosol 30.32 65.02
VIT_00s0194g00260.t01 Wine grape cytosol 59.22 57.19
Solyc04g015010.2.1 Tomato cytosol 47.16 54.62
Bra026236.1-P Field mustard cytosol 47.16 53.52
CDY42967 Canola cytosol, nucleus, plasma membrane 47.34 53.4
CDY35590 Canola cytosol 48.58 53.31
PGSC0003DMT400038827 Potato cytosol 47.7 53.27
AT4G17220.1 Thale cress cytosol 48.4 53.22
CDX90483 Canola cytosol 46.81 52.49
Solyc11g012660.1.1 Tomato nucleus 51.95 52.32
CDY09638 Canola cytosol 46.45 52.09
GSMUA_Achr7P26720_001 Banana cytosol 46.1 50.49
KRH49658 Soybean cytosol 46.63 43.04
KRH70354 Soybean endoplasmic reticulum 46.63 42.97
KRG95100 Soybean nucleus 43.09 41.4
KRH41720 Soybean cytosol 45.04 41.23
KRH60419 Soybean cytosol, plastid 44.68 40.91
EER95273 Sorghum cytosol 37.06 40.9
KRH66768 Soybean mitochondrion 35.64 40.85
Zm00001d028219_P001 Maize cytosol 36.17 39.92
Os03t0215700-01 Rice cytosol 35.99 39.42
TraesCS4B01G245400.1 Wheat nucleus 36.35 38.61
HORVU4Hr1G067630.12 Barley nucleus 34.4 36.95
TraesCS4A01G078900.2 Wheat nucleus 34.57 36.72
TraesCS4D01G244000.1 Wheat nucleus 33.51 35.59
Protein Annotations
MapMan:35.1UniProt:A0A0R0F6M3EMBL:ACUP02010293ncoils:CoilEnsemblPlantsGene:GLYMA_17G006600GO:GO:0003674
GO:GO:0005488GO:GO:0005515GO:GO:0007010GO:GO:0008017GO:GO:0008150GO:GO:0009987
GO:GO:0016043EnsemblPlants:KRH01966ProteinID:KRH01966ProteinID:KRH01966.1InterPro:MAP70PFAM:PF07058
PANTHER:PTHR31246PANTHER:PTHR31246:SF5UniParc:UPI0006EDF5B3SEG:seg::
Description
hypothetical protein
Coordinates
chr17:-:599077..602371
Molecular Weight (calculated)
64247.0 Da
IEP (calculated)
9.560
GRAVY (calculated)
-0.772
Length
564 amino acids
Sequence
(BLAST)
001: MVSCEEKYGE KLTLVQPDPV ALEINRLQNQ LKEKDKELAT CQGEMKALRS TEALKDKAIE ELRNGASKLD ERLRVTEDHL KQKNLEIKKL TDEKKDALAS
101: QYAAEATLRR VHANQKDEDF VPIESVIAPL EAEIKMYRNE ITALQEDKKA LEQLTKSKES ALLEAERILR SALERALVVE EVEKKLLEKN HRQKILEVEK
201: LSKTIQQLEE VILASGATAN AVRDCQRQIS ELQEEKRTLE RELARVKVSA NRIANVVANE WKDENDKVMP VRQWLEERRI MQIQQLKDKL AISERTARAE
301: SQLKDKLKLR LRTLEEGLKH FSSYPITLNV SYASPKAEKS NILAFLTTNG GLRKRSTSQP RASSVGSSLF QTPNIKNNTD IVAGNLKLGS PTKKYGSTEN
401: MLKKGMWALR SKVANNGEKE NEMQVKTDMT LNRYTDESEA TEIKTIVNLD EDAESKKPNG SSRDDVVSGF LYDKLQKEVI NLRKSCEIKD SSLLAKDEEI
501: KMLIKKVDVL TKAMEVEWKK MKREAAAREK EASSTKSDDN RKKRSGNSSK RFFNFTFCSV ANNC
Best Arabidopsis Sequence Match ( AT4G17220.1 )
(BLAST)
001: MTAAENPFVS DTSSLQSQLK EKEKELLAAK AEVEALRTNE ELKDRVFKEL RENVRKLEEK LGATENQVDQ KELERKKLEE EKEDALAAQD AAEEALRRVY
101: THQQDDDSLP LESIIAPLES QIKIHKHEIS ALQEDKKALE RLTKSKESAL LEAERILRSA LERALIVEEV QNHNFELRRQ IEICQDENKF LEKINRQKVL
201: EIEKLSQSIV ELEEAILAGG TAANAVRDYR RQISQLNDEK RTLERELARV KVSASRVALA VANEWKDEND RVMPVKQWLE ERRILHGEMQ KLKDKLAVSE
301: RTAKAESQLK ERLKLRLKTI EDGLKGPNTF FVSPTTKTEK SGKILGFLTS GGGSKKRSSS QLRGSVTGRI HAMNQPIDRV GESDEMENSK ITANGLTDQH
401: EEDSERKTEE DGNVYSEDMV SGFLYDRLQK EVIALRKLCE SKEGTINAKN EEIKMLLKKV DALTKAIEVE TKKAKREAAA REKENALAML NEESKLCRKA
501: KLPRSRIPNP RCQ
Arabidopsis Description
MAP70.5Microtubule-associated protein 70-5 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYX3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.