Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH11576 | Soybean | cytosol | 95.27 | 95.27 |
| PGSC0003DMT400034592 | Potato | cytosol | 33.63 | 73.0 |
| KRH01966 | Soybean | mitochondrion | 68.3 | 69.15 |
| KRH51187 | Soybean | cytosol | 65.5 | 65.27 |
| Solyc04g015010.2.1 | Tomato | cytosol | 51.31 | 60.16 |
| VIT_00s0194g00260.t01 | Wine grape | cytosol | 59.72 | 58.39 |
| PGSC0003DMT400038827 | Potato | cytosol | 50.96 | 57.62 |
| AT4G17220.1 | Thale cress | cytosol | 50.79 | 56.53 |
| Bra026236.1-P | Field mustard | cytosol | 48.86 | 56.14 |
| CDX90483 | Canola | cytosol | 49.39 | 56.06 |
| CDY42967 | Canola | cytosol, nucleus, plasma membrane | 49.04 | 56.0 |
| CDY35590 | Canola | cytosol | 50.26 | 55.84 |
| CDY09638 | Canola | cytosol | 48.69 | 55.27 |
| Solyc11g012660.1.1 | Tomato | nucleus | 53.94 | 55.0 |
| GSMUA_Achr7P26720_001 | Banana | cytosol | 47.46 | 52.62 |
| KRH66768 | Soybean | mitochondrion | 37.65 | 43.7 |
| KRH49658 | Soybean | cytosol | 46.58 | 43.54 |
| KRH70354 | Soybean | endoplasmic reticulum | 46.58 | 43.46 |
| KRG95100 | Soybean | nucleus | 44.13 | 42.93 |
| KRH41720 | Soybean | cytosol | 45.53 | 42.21 |
| EER95273 | Sorghum | cytosol | 37.65 | 42.07 |
| Os03t0215700-01 | Rice | cytosol | 37.83 | 41.94 |
| KRH60419 | Soybean | cytosol, plastid | 45.18 | 41.88 |
| TraesCS4B01G245400.1 | Wheat | nucleus | 38.35 | 41.24 |
| HORVU4Hr1G067630.12 | Barley | nucleus | 37.65 | 40.95 |
| Zm00001d028219_P001 | Maize | cytosol | 36.43 | 40.7 |
| TraesCS4A01G078900.2 | Wheat | nucleus | 36.6 | 39.36 |
| TraesCS4D01G244000.1 | Wheat | nucleus | 35.55 | 38.23 |
Protein Annotations
| EntrezGene:100817640 | MapMan:35.1 | EMBL:ACUP02005382 | ncoils:Coil | EnsemblPlantsGene:GLYMA_09G013100 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0007010 | GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016043 | UniProt:K7LB86 | EnsemblPlants:KRH36588 | ProteinID:KRH36588 | ProteinID:KRH36588.1 | ProteinID:KRH36589.1 |
| InterPro:MAP70 | PFAM:PF07058 | PANTHER:PTHR31246 | PANTHER:PTHR31246:SF5 | UniParc:UPI0002964EF3 | SEG:seg |
Description
hypothetical protein
Coordinates
chr9:+:995968..1001805
Molecular Weight (calculated)
65118.6 Da
IEP (calculated)
8.428
GRAVY (calculated)
-0.824
Length
571 amino acids
Sequence
(BLAST)
(BLAST)
001: MVASEEIYGG EELSLVQPDP MGLQIDRLHN QLTEKVKELA NCQSEIKALR ATEAKKDKAI EELRNEVGKL DDKLRLTEDH LKHKKLEIKK LTEEKKDALA
101: AQYAAEATLR RLHADQKEDD FVPLESVITP LEAEIKMYRN EIASLQEDKK ALERLTKSKE AALLEAEKIL RSALERVLIV EEVQNENFDL KRQIEICQEE
201: IKILEKTHRQ KILEVEKLSQ TIHELEEIIL SSGVNANAIR DYQRQISELQ EEKRTLEREL ARVKVSANRV ATVVANEWKD ENDKVMPVKQ WLEERRIMQA
301: EMQRLKDKLA ISERTAKAES QLKDKLKLRL KTLEEGLKHF SNHPVSSNSV SAKSEKSKIL SFLTTNSGLR NRSTSQPRGS AIGSSLFQKS NAKSNTDSVT
401: GSLIPGSIMK KKYGSAENVL KKGIWASRHK VADSDEKENE MQVNAGMNSN KCNDEKEAAE IKTSIDDNDD SKSNSCNDLG SNDVVSGFLY DRLQKEFINL
501: RKSCEIKESN LHTKDEEIKI LTKKVDALTK AMEIEWKKMK REAAAREKEA ASTKSDDNRK LRRSNSSRRM I
101: AQYAAEATLR RLHADQKEDD FVPLESVITP LEAEIKMYRN EIASLQEDKK ALERLTKSKE AALLEAEKIL RSALERVLIV EEVQNENFDL KRQIEICQEE
201: IKILEKTHRQ KILEVEKLSQ TIHELEEIIL SSGVNANAIR DYQRQISELQ EEKRTLEREL ARVKVSANRV ATVVANEWKD ENDKVMPVKQ WLEERRIMQA
301: EMQRLKDKLA ISERTAKAES QLKDKLKLRL KTLEEGLKHF SNHPVSSNSV SAKSEKSKIL SFLTTNSGLR NRSTSQPRGS AIGSSLFQKS NAKSNTDSVT
401: GSLIPGSIMK KKYGSAENVL KKGIWASRHK VADSDEKENE MQVNAGMNSN KCNDEKEAAE IKTSIDDNDD SKSNSCNDLG SNDVVSGFLY DRLQKEFINL
501: RKSCEIKESN LHTKDEEIKI LTKKVDALTK AMEIEWKKMK REAAAREKEA ASTKSDDNRK LRRSNSSRRM I
001: MEERGFMSPS LAISASYREG GSKGMSRRRS MRPSFDADNE FMNLLHGSDP VRIELNRLEN EVRDKDRELS EGQAEIKALR LSERQREKAV EELTEELGKM
101: AEKLKLIENL LESKNLEIKK INEEKKASMA AQFAAEASLR RVHAAQKDDD MPPIEAILAP LEAELKLSRQ EIAKLQDDNK SLDRLTKSKE AALLDAERTV
201: QSALAKASMV DDLQNKNQEL MKQIEICQEE NRIIDKMHRQ KVAEVEKLMQ SVRELEEAVL AGGAAANAVR DYQRKFQEMN EERKILEREL ARAKVNANRV
301: ATVVANEWKD SNDKVMPVRQ WLEERRFLQG EMQQLRDKLA IADRAAKSEA QLKEKFLLRL RVLEESLKGP TSSSSRGTSV GRSSSNGPTR RQSLGGAETS
401: PKITSNGSLI KRTPSSQLRS LTASASTVLK HAKGTSRSFD GGTRSLDRSK VLINGPRSNF PLNHKSSEGT SRGESPSSIK GEEESADKAT NNDSVPGVLY
501: DLLQKEVITL RKAAHEKDQS LRDKDEAIEM LAKKVETLTK AMDVEAKKMR REVAVMGKEV AAMRVVDKGQ QDSKTRRLSV SKGNTAQLLS GRVSGRIGMT
601: RSTQ
101: AEKLKLIENL LESKNLEIKK INEEKKASMA AQFAAEASLR RVHAAQKDDD MPPIEAILAP LEAELKLSRQ EIAKLQDDNK SLDRLTKSKE AALLDAERTV
201: QSALAKASMV DDLQNKNQEL MKQIEICQEE NRIIDKMHRQ KVAEVEKLMQ SVRELEEAVL AGGAAANAVR DYQRKFQEMN EERKILEREL ARAKVNANRV
301: ATVVANEWKD SNDKVMPVRQ WLEERRFLQG EMQQLRDKLA IADRAAKSEA QLKEKFLLRL RVLEESLKGP TSSSSRGTSV GRSSSNGPTR RQSLGGAETS
401: PKITSNGSLI KRTPSSQLRS LTASASTVLK HAKGTSRSFD GGTRSLDRSK VLINGPRSNF PLNHKSSEGT SRGESPSSIK GEEESADKAT NNDSVPGVLY
501: DLLQKEVITL RKAAHEKDQS LRDKDEAIEM LAKKVETLTK AMDVEAKKMR REVAVMGKEV AAMRVVDKGQ QDSKTRRLSV SKGNTAQLLS GRVSGRIGMT
601: RSTQ
Arabidopsis Description
MAP70.4Microtubule-associated protein 70-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQU7]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.