Factsheet for Bra026236.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000891.1-P
Bra001412.1-P
Bra004053.1-P
Bra004279.1-P
Bra004677.1-P
Bra005553.1-P
Bra005847.1-P
Bra006526.1-P
Bra008559.1-P
Bra009093.1-P
Bra011328.1-P
Bra012976.1-P
Bra020076.1-P
Bra023148.1-P
Bra029148.1-P
Bra030218.1-P
Bra030520.1-P
Bra032556.1-P
Bra034827.1-P
Bra039871.1-P
Bra041171.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G17220.1	Bra030520.1-P	AT1G03140.1	21798944
AT4G17220.1	Bra032556.1-P	AT1G03140.1	21798944
AT4G17220.1	Bra041171.1-P	AT1G03140.1	21798944
AT4G17220.1	Bra023148.1-P	AT1G30860.1	21798944
AT4G17220.1	Bra039871.1-P	AT1G30860.1	21798944
AT4G17220.1	Bra004053.1-P	AT1G68060.1	21798944
AT4G17220.1	Bra004279.1-P	AT1G68060.1	21798944
AT4G17220.1	Bra030218.1-P	AT2G22680.1	21798944
AT4G17220.1	Bra005553.1-P	AT2G32840.1	21798944
AT4G17220.1	Bra004677.1-P	AT2G42260.1	21798944
AT4G17220.1	Bra001412.1-P	AT3G11590.1	21798944
AT4G17220.1	Bra034827.1-P	AT3G11590.1	21798944
AT4G17220.1	Bra000891.1-P	AT4G02150.1	21798944
AT4G17220.1	Bra008559.1-P	AT4G02150.1	21798944
AT4G17220.1	Bra011328.1-P	AT4G32190.1	21798944
AT4G17220.1	Bra005847.1-P	AT5G05190.1	21798944
AT4G17220.1	Bra009093.1-P	AT5G05190.1	21798944
AT4G17220.1	Bra006526.1-P	AT5G19960.1	21798944
AT4G17220.1	Bra020076.1-P	AT5G19960.1	21798944
AT4G17220.1	Bra029148.1-P	AT5G52010.1	21798944
AT4G17220.1	Bra012976.1-P	AT5G61230.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42967	Canola	cytosol, nucleus, plasma membrane	94.37	93.8
CDY35590	Canola	cytosol	92.96	89.88
AT4G17220.1	Thale cress	cytosol	78.47	76.02
PGSC0003DMT400034592	Potato	cytosol	34.81	65.78
Solyc04g015010.2.1	Tomato	cytosol	51.91	52.98
PGSC0003DMT400038827	Potato	cytosol	51.91	51.09
KRH11576	Soybean	cytosol	56.54	49.21
KRH36588	Soybean	cytosol	56.14	48.86
Solyc11g012660.1.1	Tomato	nucleus	54.93	48.75
VIT_00s0194g00260.t01	Wine grape	cytosol	56.74	48.29
KRH01966	Soybean	mitochondrion	53.52	47.16
KRH51187	Soybean	cytosol	53.12	46.07
GSMUA_Achr7P26720_001	Banana	cytosol	45.27	43.69
Bra025859.1-P	Field mustard	nucleus	36.42	39.96
Bra010978.1-P	Field mustard	nucleus	47.08	38.3
Bra026184.1-P	Field mustard	nucleus	45.88	38.26
Bra004279.1-P	Field mustard	nucleus, plastid	47.28	37.6
Bra004053.1-P	Field mustard	nucleus, plastid	46.48	37.38
Bra012493.1-P	Field mustard	nucleus	45.88	37.19
Zm00001d028219_P001	Maize	cytosol	38.23	37.18
Os03t0215700-01	Rice	cytosol	38.43	37.09
Bra026800.1-P	Field mustard	nucleus	44.67	36.94
Bra032784.1-P	Field mustard	nucleus	44.27	36.91
Bra024854.1-P	Field mustard	nucleus, plastid	46.68	36.83
EER95273	Sorghum	cytosol	37.83	36.79
HORVU4Hr1G067630.12	Barley	nucleus	37.42	35.43
TraesCS4B01G245400.1	Wheat	nucleus	37.63	35.22
TraesCS4A01G078900.2	Wheat	nucleus	37.42	35.03
TraesCS4D01G244000.1	Wheat	nucleus	36.82	34.46

Protein Annotations

MapMan:35.1	EnsemblPlantsGene:Bra026236	EnsemblPlants:Bra026236.1	EnsemblPlants:Bra026236.1-P	ncoils:Coil	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0007010	GO:GO:0007275	GO:GO:0008017	GO:GO:0008150
GO:GO:0009832	GO:GO:0009987	GO:GO:0010051	GO:GO:0016043	UniProt:M4EBS7	InterPro:MAP70
PFAM:PF07058	PANTHER:PTHR31246	PANTHER:PTHR31246:SF5	UniParc:UPI0002544309	SEG:seg	:

Description

AT4G17220 (E=3e-193) ATMAP70-5 | ATMAP70-5 (microtubule-associated proteins 70-5); microtubule binding

Coordinates

chrA01:+:10481895..10484280

Molecular Weight (calculated)

56446.5 Da

IEP (calculated)

8.423

GRAVY (calculated)

-0.795

Length

497 amino acids

Sequence
(BLAST)

001: MTAGENPFAS NTSSLQNQLR EKDKELLAAK AEIEALRTNE ELKNREFGEL RENVRKLEER LGVSKNLVVQ KEVEMKKLEE EKEDALAAQD AAEEALRRVY
101: THQQEDDPLP LESVIAPLEA QIKFQKHQIS ALQEDKKALE RLTKSKESAL LEAERILKSA LERALIVEEV QNHNFELRRQ IEICQEEYKF LEKINRQKVL
201: EIEKLSQTIG ELEEAILAGG TAANAEEKRT LERELSRVKV SASRVALAVA NEWKDENDRV MPVKQWLEER RLLHGEMQKL KDKLAVSERT AKAESQLKER
301: LKLRLKTIED GLKSPNMFTV SPTTTKAEKS GKILGFLTSG VGGSKKRSTS QPRGSLTGRI HALNQPINRG EERDGKENSK VTSNGLTNVD EEEEQRKAEA
401: DGNEDMVSGF LYDRLQKEVI SLRKICESKE GTINAKNEEI KMLLKKVDAL TKAIEVETKK AKREAAAREK ENALAILNEG SKRCRKANLP RRFVSFF

Best Arabidopsis Sequence Match ( AT4G17220.1 )
(BLAST)

001: MTAAENPFVS DTSSLQSQLK EKEKELLAAK AEVEALRTNE ELKDRVFKEL RENVRKLEEK LGATENQVDQ KELERKKLEE EKEDALAAQD AAEEALRRVY
101: THQQDDDSLP LESIIAPLES QIKIHKHEIS ALQEDKKALE RLTKSKESAL LEAERILRSA LERALIVEEV QNHNFELRRQ IEICQDENKF LEKINRQKVL
201: EIEKLSQSIV ELEEAILAGG TAANAVRDYR RQISQLNDEK RTLERELARV KVSASRVALA VANEWKDEND RVMPVKQWLE ERRILHGEMQ KLKDKLAVSE
301: RTAKAESQLK ERLKLRLKTI EDGLKGPNTF FVSPTTKTEK SGKILGFLTS GGGSKKRSSS QLRGSVTGRI HAMNQPIDRV GESDEMENSK ITANGLTDQH
401: EEDSERKTEE DGNVYSEDMV SGFLYDRLQK EVIALRKLCE SKEGTINAKN EEIKMLLKKV DALTKAIEVE TKKAKREAAA REKENALAML NEESKLCRKA
501: KLPRSRIPNP RCQ

Arabidopsis Description

MAP70.5Microtubule-associated protein 70-5 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYX3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.