Factsheet for Bra004053.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 3
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra012987.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G68060.1	Bra012987.1-P	AT5G61010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07403	Canola	nucleus, plastid	98.22	98.22
Bra004279.1-P	Field mustard	nucleus, plastid	92.07	91.04
AT1G68060.1	Thale cress	nucleus, plastid	89.64	89.07
Bra032784.1-P	Field mustard	nucleus	79.94	82.89
Bra010978.1-P	Field mustard	nucleus	81.88	82.82
Bra012493.1-P	Field mustard	nucleus	81.07	81.73
KRH49658	Soybean	cytosol	74.76	75.61
KRH70354	Soybean	endoplasmic reticulum	74.43	75.16
Solyc04g008040.2.1	Tomato	nucleus	74.27	74.39
KRH60419	Soybean	cytosol, plastid	74.11	74.35
KRH41720	Soybean	cytosol	74.11	74.35
PGSC0003DMT400075913	Potato	cytosol	73.95	74.07
Solyc01g005330.2.1	Tomato	cytosol	74.43	73.95
VIT_01s0011g05790.t01	Wine grape	cytosol	76.21	73.94
PGSC0003DMT400051425	Potato	cytosol, nucleus, plasma membrane	74.43	73.72
PGSC0003DMT400056068	Potato	cytosol	73.46	72.99
Solyc05g017980.2.1	Tomato	cytosol	73.14	72.67
Bra026800.1-P	Field mustard	nucleus	70.39	72.38
Bra026184.1-P	Field mustard	nucleus	69.58	72.15
Os02t0736100-01	Rice	cytosol	69.26	71.45
Bra025859.1-P	Field mustard	nucleus	52.27	71.3
TraesCS6D01G278500.1	Wheat	cytosol	68.93	71.12
TraesCS6A01G298800.1	Wheat	cytosol	68.45	70.62
TraesCS6B01G328200.1	Wheat	cytosol	65.7	70.61
TraesCS7D01G204000.1	Wheat	nucleus	68.61	69.85
TraesCS7A01G200700.1	Wheat	nucleus	68.28	69.52
TraesCS7B01G107500.1	Wheat	nucleus	68.28	69.52
Bra024854.1-P	Field mustard	nucleus, plastid	70.06	68.73
EER89530	Sorghum	nucleus	66.99	68.32
EES07297	Sorghum	cytosol	65.05	68.14
Os06t0251700-01	Rice	nucleus	66.83	67.93
HORVU7Hr1G041170.1	Barley	nucleus	67.96	67.74
Zm00001d037291_P001	Maize	nucleus	66.34	67.66
Zm00001d044724_P001	Maize	cytosol	66.18	67.49
Zm00001d017961_P003	Maize	cytosol	64.24	67.29
HORVU0Hr1G017080.1	Barley	nucleus, plastid	68.77	63.06
Bra026236.1-P	Field mustard	cytosol	37.38	46.48

Protein Annotations

EnsemblPlants:Bra004053.1	EnsemblPlants:Bra004053.1-P	EnsemblPlantsGene:Bra004053	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0007010	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	InterPro:MAP70
ncoils:Coil	PANTHER:PTHR31246	PANTHER:PTHR31246:SF2	PFAM:PF07058	SEG:seg	UniParc:UPI0002541319
UniProt:M4CIL9	MapMan:35.1	:	:	:	:

Description

AT1G68060 (E=4e-242) ATMAP70-1 | ATMAP70-1 (microtubule-associated proteins 70-1); microtubule binding

Coordinates

chrA07:+:16554511..16557187

Molecular Weight (calculated)

68916.3 Da

IEP (calculated)

9.091

GRAVY (calculated)

-0.879

Length

618 amino acids

Sequence
(BLAST)

001: MSDVSADGGY SETPYPSLTV SASYKESSGG GKSSSRRRPV RPSFDASAAA DNEFITLLHG SDPVKLELNR LENEVRDKDR ELGEAHAEIR ALRLSERQRE
101: KAVEELTDEL TKLEEKLKLT ESLLQGKNLE IRKINEEKKA SMAAQFAAEA TLRRVHAAQK DDDMPPIEAI LAPLEAELKL ARSEIGKLQE DNRALDRLTK
201: SKEAALLDAE RTVQSAMAKA ALVDDLQNKN QELMKQIEIC QEENKILDKM HRQKVAEVEK LTQTVRELEE AVLAGGAAAN AVRDYQRKFQ EMNEERKTLD
301: RELARAKVTA NRVATVVANE WKDGNDKVMP VKQWLEERRF LQGEMQQLRD KLAISDRAAK SEAQLKDKFQ LRLKVLEETL RGTSRNTTEG RSMGNGSSRR
401: QSLGGSDNLQ KFASNGFLPK KSPSSQMRNA FNSNSNSVLR NAKGTSRSFD GGTRSLDRGK ALLNGPGKYS FNKACDEAKE SESPSAWKEE DSEEKPPSEL
501: PPPTTEDNVP GVLYDLLQKE VVALRKSSHE KDQSLKDKDD AIEMLAKKVE TLTKAMEVEA KKMRREVAAM EKEVAAMRVD KDQDNRARRS SNTKNSSTTA
601: QILAGRAAGR SGLTRSTQ

Best Arabidopsis Sequence Match ( AT1G68060.1 )
(BLAST)

001: MSDVSADGGF LSAEQATTPV AIPTPYPSLT VSASYKEKSS GRRRPVRPSF DAAADNEFIT LLHGSDPVKV ELNRLENEVR DKDRELSEAN AEIKALRLSE
101: RQREKACEEL TDELAKLDGK LKLTESLLQS KNLEIKKINE EKKASMAAQF AAEATLRRVH AAQKDDDMPP IEAILAPLEA ELKLARSEIG KLQEDNRALD
201: RLTKSKEAAL LDAERTVETA LAKAALVDDL QNKNQELMKQ IEICQEENKI LDRMHRQKVA EVEKLTQTVR ELEEAVLAGG AAANAVRDYQ RKFQEMNEER
301: KTLDRELARA KVTANRVATV VANEWKDGND KVMPVKQWLE ERRFLQGEMQ QLRDKLAISD RAAKSEAQLK DKFQLRLRVL EETLRGTSSI SIRNTPEGRS
401: MSNGPSRRQS IGGSDNLQKF ASNGFLSKKT PMRNSFTSNS TSVLKNAKGT SKSFDGGTRS LDRGKALLKG PGNYSFNKAC DETKESESPN TWKEDSEEKP
501: PSELPAPATE DNVPGVLYDL LQKEVVALRK SSHEKDQSLK DKDDAIEMLA KKVETLTKAM EVEAKKMRRE VAAMEKEVAA MRVDKDQDNR AKRSSNTKPS
601: SNTAQILAAR AAGRSGLTRS TQ

Arabidopsis Description

MAP70.1Microtubule-associated protein 70-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9X0]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.