Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| PGSC0003DMT400063083 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G68060.1 | PGSC0003DMT400063083 | AT5G61010.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g017980.2.1 | Tomato | cytosol | 97.91 | 97.91 |
| PGSC0003DMT400051425 | Potato | cytosol, nucleus, plasma membrane | 86.17 | 85.9 |
| PGSC0003DMT400075913 | Potato | cytosol | 80.87 | 81.52 |
| KRH70354 | Soybean | endoplasmic reticulum | 78.94 | 80.23 |
| KRH49658 | Soybean | cytosol | 78.78 | 80.2 |
| KRH60419 | Soybean | cytosol, plastid | 78.78 | 79.55 |
| KRH41720 | Soybean | cytosol | 78.46 | 79.22 |
| VIT_01s0011g05790.t01 | Wine grape | cytosol | 79.1 | 77.24 |
| PGSC0003DMT400038689 | Potato | cytosol | 38.75 | 74.84 |
| Os02t0736100-01 | Rice | cytosol | 71.22 | 73.96 |
| AT1G68060.1 | Thale cress | nucleus, plastid | 73.95 | 73.95 |
| CDY04200 | Canola | plastid | 73.15 | 73.74 |
| CDY07403 | Canola | nucleus, plastid | 73.15 | 73.62 |
| Bra004053.1-P | Field mustard | nucleus, plastid | 72.99 | 73.46 |
| Bra004279.1-P | Field mustard | nucleus, plastid | 73.47 | 73.12 |
| CDX96050 | Canola | nucleus, plastid | 73.47 | 73.12 |
| AT1G14840.1 | Thale cress | plastid | 70.9 | 73.01 |
| CDX84971 | Canola | cytosol | 72.19 | 73.01 |
| TraesCS6B01G328200.1 | Wheat | cytosol | 67.36 | 72.87 |
| TraesCS6D01G278500.1 | Wheat | cytosol | 69.94 | 72.62 |
| TraesCS6A01G298800.1 | Wheat | cytosol | 69.94 | 72.62 |
| CDY01879 | Canola | nucleus | 72.83 | 72.6 |
| CDY27573 | Canola | nucleus, plastid | 72.99 | 72.52 |
| TraesCS7A01G200700.1 | Wheat | nucleus | 70.74 | 72.49 |
| TraesCS7D01G204000.1 | Wheat | nucleus | 70.74 | 72.49 |
| CDY40783 | Canola | plastid | 71.38 | 72.43 |
| TraesCS7B01G107500.1 | Wheat | nucleus | 70.58 | 72.32 |
| EER89530 | Sorghum | nucleus | 69.94 | 71.78 |
| CDY45293 | Canola | nucleus | 69.13 | 71.55 |
| Bra026184.1-P | Field mustard | nucleus | 68.49 | 71.48 |
| CDY51769 | Canola | nucleus | 69.13 | 71.43 |
| Bra025859.1-P | Field mustard | nucleus | 51.93 | 71.3 |
| Bra012493.1-P | Field mustard | nucleus | 70.26 | 71.29 |
| Os06t0251700-01 | Rice | nucleus | 69.61 | 71.22 |
| EES07297 | Sorghum | cytosol | 67.52 | 71.19 |
| Bra032784.1-P | Field mustard | nucleus | 68.17 | 71.14 |
| CDX81676 | Canola | plastid | 67.68 | 71.11 |
| CDY33736 | Canola | nucleus | 69.13 | 71.07 |
| Bra010978.1-P | Field mustard | nucleus | 69.77 | 71.03 |
| CDY03865 | Canola | nucleus | 70.26 | 70.94 |
| Zm00001d044724_P001 | Maize | cytosol | 68.97 | 70.79 |
| Bra026800.1-P | Field mustard | nucleus | 68.33 | 70.72 |
| Zm00001d037291_P001 | Maize | nucleus | 68.81 | 70.63 |
| HORVU7Hr1G041170.1 | Barley | nucleus | 70.26 | 70.48 |
| Zm00001d017961_P003 | Maize | cytosol | 66.72 | 70.34 |
| CDY36126 | Canola | nucleus | 69.45 | 70.02 |
| AT2G01750.2 | Thale cress | nucleus | 70.9 | 70.0 |
| CDY17639 | Canola | nucleus, plastid | 69.45 | 69.34 |
| CDY36256 | Canola | nucleus, plastid | 69.29 | 69.29 |
| Bra024854.1-P | Field mustard | nucleus, plastid | 69.61 | 68.73 |
| AT1G24764.3 | Thale cress | endoplasmic reticulum, extracellular | 73.63 | 66.09 |
| HORVU0Hr1G017080.1 | Barley | nucleus, plastid | 70.1 | 64.69 |
| PGSC0003DMT400034592 | Potato | cytosol | 26.85 | 63.5 |
| CDY24415 | Canola | nucleus | 23.47 | 57.25 |
| PGSC0003DMT400038827 | Potato | cytosol | 41.0 | 50.49 |
| PGSC0003DMT400038687 | Potato | cytosol | 23.47 | 45.48 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400056068 | EnsemblPlantsGene:PGSC0003DMG400021781 | EntrezGene:102604360 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0007010 | GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | InterPro:MAP70 |
| ncoils:Coil | PANTHER:PTHR31246 | PANTHER:PTHR31246:SF2 | PFAM:PF07058 | PGSC:PGSC0003DMG400021781 | RefSeq:XP_006343174.1 |
| SEG:seg | UniParc:UPI000295C373 | UniProt:M1BYW7 | MapMan:35.1 | : | : |
Description
Myosin heavy chain, clone [Source:PGSC_GENE;Acc:PGSC0003DMG400021781]
Coordinates
chr5:+:18255296..18263277
Molecular Weight (calculated)
69353.3 Da
IEP (calculated)
9.098
GRAVY (calculated)
-0.821
Length
622 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEDGSVMET PEMISGENTG DARTATNEVA LTPTVSGGGK GTSRRRMSVV RPSLDADEFM TLLHGSDPVK LELNRLENEV RDKDRELSEA QAEIKALRLS
101: ERLREKAVEE LTDELTRVDE KLKLTESLLE SKNLEIKKIN DEKKASMAAQ FAAEATLRRV HAAQKDDDMP PIEAILAPLE AELKLARHET AKLQDDNKAL
201: DRLTKSKEAA LLDAERTVQS ALAKASMVDD LQNKNQELMK QIEICQEENK ILDRMHRQKV AEVEKLTQSV RELEEAVLAG GAAANAVRDY QRKVQEMNEE
301: RKTLDRELAR AKVTANRVAT VVANEWKDAN DKVMPVKQWL EERRILQGEM QQLRDKLAIT ERTAKSEALL KDKYQLRLKV LEETLRPSST SSRNTTDGRS
401: SSNGPSRRQS LGGAESISKL TSNGFLPKRS PSFQLRSSGS STILKHAKGT SKSFDGGSRS LDRGKKLLNV TGPNFNSSKS VDGAKDNETE STSWKSNQDE
501: KRTDLPVTET EDTVPGLLYD LLQKEVVALR KAGHEKDQSL KDKDDAIEML AKKVETLTKA MEVEAKKMRR EVSAMEKEVA AMRVEKEQEN RAKRLGNSKG
601: PVNSSQLLPG RSVTRSGLTR TQ
101: ERLREKAVEE LTDELTRVDE KLKLTESLLE SKNLEIKKIN DEKKASMAAQ FAAEATLRRV HAAQKDDDMP PIEAILAPLE AELKLARHET AKLQDDNKAL
201: DRLTKSKEAA LLDAERTVQS ALAKASMVDD LQNKNQELMK QIEICQEENK ILDRMHRQKV AEVEKLTQSV RELEEAVLAG GAAANAVRDY QRKVQEMNEE
301: RKTLDRELAR AKVTANRVAT VVANEWKDAN DKVMPVKQWL EERRILQGEM QQLRDKLAIT ERTAKSEALL KDKYQLRLKV LEETLRPSST SSRNTTDGRS
401: SSNGPSRRQS LGGAESISKL TSNGFLPKRS PSFQLRSSGS STILKHAKGT SKSFDGGSRS LDRGKKLLNV TGPNFNSSKS VDGAKDNETE STSWKSNQDE
501: KRTDLPVTET EDTVPGLLYD LLQKEVVALR KAGHEKDQSL KDKDDAIEML AKKVETLTKA MEVEAKKMRR EVSAMEKEVA AMRVEKEQEN RAKRLGNSKG
601: PVNSSQLLPG RSVTRSGLTR TQ
001: MSDVSGDGDL SATVTEHEVT PQPPVSSATY PSLTVSASYK ESSGGKSSSK RRPIRPSFDA AADNEFITLL HGSDPVKVEL NRLENEVRDK DRELGEANAE
101: IKALRLSERQ REKAVEELTE ELTKLDEKLK LTESILESKN LEIKKINEEK KASMAAQFAA EATLRRVHAA QKDDDMPPIE AILAPLEAEL KLARSEIGKL
201: QEDNRALDRL TKSKEAALLE AERTVEAAMA KAAMVDDLQN KNQELMKQIE ICQEENKILD RMHRQKVAEV EKLTQTVREL EEAVLAGGAA ANAVRDYQRK
301: FQEMNEERKT LDRELARAKV TANRVATVVA NEWKDGNDKV MPVKQWLEER RFLQGEMQQL RDKLAITDRA AKSEAQLKEK FQLRLKVLEE TLRGTSSSAT
401: RNTPEARSMS NGPSRRQSLG GAENLQKFTS NGALSKKAPA SQMRHSLSIN STSVLKNAKG TSKSFDGGTR SVDRGKALLN GPGNYSFNKA TDDSKEAESG
501: NGWKENSEEK PQSEDPEAAT EDSVPGVLYD LLQKEVVSLR KASNEKDQSL KDKDDAIEML AKKVETLTKA MEVEAKKMRR EVAAMEKEVA AMRVEKDQDA
601: RAKRFSNSKS PSNTAQILAG RAAGRSGGLT KSTQ
101: IKALRLSERQ REKAVEELTE ELTKLDEKLK LTESILESKN LEIKKINEEK KASMAAQFAA EATLRRVHAA QKDDDMPPIE AILAPLEAEL KLARSEIGKL
201: QEDNRALDRL TKSKEAALLE AERTVEAAMA KAAMVDDLQN KNQELMKQIE ICQEENKILD RMHRQKVAEV EKLTQTVREL EEAVLAGGAA ANAVRDYQRK
301: FQEMNEERKT LDRELARAKV TANRVATVVA NEWKDGNDKV MPVKQWLEER RFLQGEMQQL RDKLAITDRA AKSEAQLKEK FQLRLKVLEE TLRGTSSSAT
401: RNTPEARSMS NGPSRRQSLG GAENLQKFTS NGALSKKAPA SQMRHSLSIN STSVLKNAKG TSKSFDGGTR SVDRGKALLN GPGNYSFNKA TDDSKEAESG
501: NGWKENSEEK PQSEDPEAAT EDSVPGVLYD LLQKEVVSLR KASNEKDQSL KDKDDAIEML AKKVETLTKA MEVEAKKMRR EVAAMEKEVA AMRVEKDQDA
601: RAKRFSNSKS PSNTAQILAG RAAGRSGGLT KSTQ
Arabidopsis Description
ATMAP70-2microtubule-associated proteins 70-2 [Source:TAIR;Acc:AT1G24764]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.