CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40783	Canola	plastid	93.51	93.96
CDX84971	Canola	cytosol	88.64	88.78
CDY27573	Canola	nucleus, plastid	88.8	87.38
CDX84402	Canola	cytosol	8.28	83.61
CDY07403	Canola	nucleus, plastid	83.12	82.85
CDY36126	Canola	nucleus	82.79	82.66
CDX96050	Canola	nucleus, plastid	82.63	81.44
CDY04200	Canola	plastid	81.01	80.88
CDY01879	Canola	nucleus	81.17	80.13
KRH49658	Soybean	cytosol	74.03	74.63
KRH70354	Soybean	endoplasmic reticulum	74.03	74.51
Solyc04g008040.2.1	Tomato	nucleus	73.7	73.58
PGSC0003DMT400075913	Potato	cytosol	73.21	73.1
KRH60419	Soybean	cytosol, plastid	73.05	73.05
VIT_01s0011g05790.t01	Wine grape	cytosol	75.49	73.0
KRH41720	Soybean	cytosol	72.56	72.56
Solyc01g005330.2.1	Tomato	cytosol	72.73	72.03
PGSC0003DMT400051425	Potato	cytosol, nucleus, plasma membrane	72.73	71.79
CDX95377	Canola	cytosol	7.31	71.43
CDY24415	Canola	nucleus	29.55	71.37
CDX81676	Canola	plastid	68.51	71.28
CDY33736	Canola	nucleus	69.97	71.24
CDY45293	Canola	nucleus	69.16	70.88
TraesCS6D01G278500.1	Wheat	cytosol	68.67	70.62
CDY51769	Canola	nucleus	68.99	70.6
PGSC0003DMT400056068	Potato	cytosol	70.94	70.26
Solyc05g017980.2.1	Tomato	cytosol	70.78	70.1
Os02t0736100-01	Rice	cytosol	68.02	69.95
TraesCS6B01G328200.1	Wheat	cytosol	65.26	69.91
TraesCS6A01G298800.1	Wheat	cytosol	67.53	69.45
CDX95376	Canola	cytosol	6.98	69.35
CDY17639	Canola	nucleus, plastid	69.97	69.18
CDY36256	Canola	nucleus, plastid	68.67	68.01
EES07297	Sorghum	cytosol	64.94	67.8
TraesCS7D01G204000.1	Wheat	nucleus	66.56	67.55
TraesCS7B01G107500.1	Wheat	nucleus	66.4	67.38
TraesCS7A01G200700.1	Wheat	nucleus	66.4	67.38
EER89530	Sorghum	nucleus	65.91	67.0
Os06t0251700-01	Rice	nucleus	66.07	66.94
Zm00001d037291_P001	Maize	nucleus	65.42	66.5
Zm00001d017961_P003	Maize	cytosol	63.47	66.27
HORVU7Hr1G041170.1	Barley	nucleus	66.4	65.97
Zm00001d044724_P001	Maize	cytosol	64.45	65.51
HORVU0Hr1G017080.1	Barley	nucleus, plastid	68.51	62.61
CDY35590	Canola	cytosol	37.66	45.14
CDX90483	Canola	cytosol	36.36	44.53
CDY42967	Canola	cytosol, nucleus, plasma membrane	35.88	44.2
CDY09638	Canola	cytosol	36.04	44.14

Protein Annotations

EnsemblPlants:CDY03865	EnsemblPlantsGene:GSBRNA2T00117342001	GO:A0A078EPG9	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0007010	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	InterPro:MAP70
ncoils:Coil	PANTHER:PTHR31246	PANTHER:PTHR31246:SF2	PFAM:PF07058	ProteinID:CDY03865	ProteinID:CDY03865.1
SEG:seg	UniParc:UPI0004EF2F5A	MapMan:35.1	:	:	:

Description

BnaC07g10900D

Coordinates

chrLK031947:+:408398..411369

Molecular Weight (calculated)

68308.5 Da

IEP (calculated)

9.533

GRAVY (calculated)

-0.840

Length

616 amino acids

Sequence
(BLAST)

001: MSDVSGDGDA TATYPSLTVS ASYKESGGGK SSSTRRPIRP SFEAAADNEL ITLLHGSDPV KVELNRLENE VRDKGRELGE AHAEIKALRL SERQREKAVE
101: ELTEELAKLG EKLKLTESIL QSKNQEIKKI NEEKKASMAA QFAAEATLRR VHAAQKDDDM PPIEAILAPF EAELKLARSE IGKLQEDNSN RALDRLTKSK
201: EAALLDAERT VEGSLAKAAM VDDLQNKNQE LMKQIEICQE ENKIIDKMHR QKVAEVEKLT QTVRELEEAV LAGGATANAV RDYQRKVQEM NEERKTLHRE
301: LARAKVTANR VATVVANEWK DGNDKVMPVK QWLEERRFLQ GEMQQLRDKL AITDRAAKSE AQLKEKFEQR LKVLEETLKG TSSSSSTTTT RNLSETRSMS
401: NGPSRRQSLG GSDNLQRLPS NGSFPKKAPS FQMRHSLSIN STSVLKNAKG TSKSFDGGTR SLDRGKALLN GPGNYSFNKA SSDESKDSEE KPQSENPAAA
501: AASEDSVPRV LYDVLQKEVV SVRKTSHEKD QSLKDKDDAI EMLARKVETL TKAMDVEAKK MRREVAAMEK EVAAMRVEKD QDNRAKRFPN SNSSSNTAQI
601: LAARAAGRSS LTKSTQ

Best Arabidopsis Sequence Match ( AT1G14840.1 )
(BLAST)

001: MEERGFMSPS LAISASYREG GSKGMSRRRS MRPSFDADNE FMNLLHGSDP VRIELNRLEN EVRDKDRELS EGQAEIKALR LSERQREKAV EELTEELGKM
101: AEKLKLIENL LESKNLEIKK INEEKKASMA AQFAAEASLR RVHAAQKDDD MPPIEAILAP LEAELKLSRQ EIAKLQDDNK SLDRLTKSKE AALLDAERTV
201: QSALAKASMV DDLQNKNQEL MKQIEICQEE NRIIDKMHRQ KVAEVEKLMQ SVRELEEAVL AGGAAANAVR DYQRKFQEMN EERKILEREL ARAKVNANRV
301: ATVVANEWKD SNDKVMPVRQ WLEERRFLQG EMQQLRDKLA IADRAAKSEA QLKEKFLLRL RVLEESLKGP TSSSSRGTSV GRSSSNGPTR RQSLGGAETS
401: PKITSNGSLI KRTPSSQLRS LTASASTVLK HAKGTSRSFD GGTRSLDRSK VLINGPRSNF PLNHKSSEGT SRGESPSSIK GEEESADKAT NNDSVPGVLY
501: DLLQKEVITL RKAAHEKDQS LRDKDEAIEM LAKKVETLTK AMDVEAKKMR REVAVMGKEV AAMRVVDKGQ QDSKTRRLSV SKGNTAQLLS GRVSGRIGMT
601: RSTQ

Arabidopsis Description

MAP70.4Microtubule-associated protein 70-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQU7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.