CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra025859.1-P	Field mustard	nucleus	73.88	98.68
Bra026800.1-P	Field mustard	nucleus	93.22	93.84
CDX81676	Canola	plastid	86.61	88.51
CDY45293	Canola	nucleus	85.29	85.86
CDY51769	Canola	nucleus	85.29	85.71
AT1G14840.1	Thale cress	plastid	84.96	85.1
CDX84402	Canola	cytosol	7.44	73.77
KRH49658	Soybean	cytosol	73.72	73.0
CDY17639	Canola	nucleus, plastid	74.38	72.23
KRH70354	Soybean	endoplasmic reticulum	72.73	71.9
CDY36256	Canola	nucleus, plastid	73.55	71.54
CDY04200	Canola	plastid	72.73	71.31
KRH41720	Soybean	cytosol	72.56	71.27
CDX84971	Canola	cytosol	72.4	71.22
CDY07403	Canola	nucleus, plastid	72.73	71.2
KRH60419	Soybean	cytosol, plastid	72.4	71.1
CDX96050	Canola	nucleus, plastid	73.22	70.88
CDY40783	Canola	plastid	71.57	70.64
CDY27573	Canola	nucleus, plastid	72.73	70.29
PGSC0003DMT400075913	Potato	cytosol	71.57	70.18
Solyc04g008040.2.1	Tomato	nucleus	71.41	70.02
CDY03865	Canola	nucleus	71.24	69.97
CDY01879	Canola	nucleus	71.74	69.55
PGSC0003DMT400056068	Potato	cytosol	71.07	69.13
Solyc01g005330.2.1	Tomato	cytosol	70.91	68.97
Solyc05g017980.2.1	Tomato	cytosol	70.91	68.97
VIT_01s0011g05790.t01	Wine grape	cytosol	72.56	68.92
PGSC0003DMT400051425	Potato	cytosol, nucleus, plasma membrane	71.07	68.91
CDY36126	Canola	nucleus	70.08	68.72
CDX95376	Canola	cytosol	6.94	67.74
Os02t0736100-01	Rice	cytosol	66.94	67.61
TraesCS6D01G278500.1	Wheat	cytosol	65.95	66.61
TraesCS6B01G328200.1	Wheat	cytosol	63.14	66.43
TraesCS6A01G298800.1	Wheat	cytosol	65.12	65.78
TraesCS7D01G204000.1	Wheat	nucleus	65.95	65.73
TraesCS7A01G200700.1	Wheat	nucleus	65.79	65.57
TraesCS7B01G107500.1	Wheat	nucleus	65.79	65.57
Os06t0251700-01	Rice	nucleus	65.79	65.46
EES07297	Sorghum	cytosol	63.31	64.92
EER89530	Sorghum	nucleus	64.96	64.85
Zm00001d037291_P001	Maize	nucleus	64.46	64.36
Zm00001d044724_P001	Maize	cytosol	64.13	64.03
HORVU7Hr1G041170.1	Barley	nucleus	65.45	63.87
Zm00001d017961_P003	Maize	cytosol	62.15	63.73
CDX95377	Canola	cytosol	6.45	61.9
HORVU0Hr1G017080.1	Barley	nucleus, plastid	65.95	59.2
CDY24415	Canola	nucleus	21.82	51.76
CDY42967	Canola	cytosol, nucleus, plasma membrane	37.02	44.8
CDY35590	Canola	cytosol	38.02	44.75
CDX90483	Canola	cytosol	36.86	44.33
CDY09638	Canola	cytosol	36.69	44.14

Protein Annotations

EnsemblPlants:CDY33736	EnsemblPlantsGene:GSBRNA2T00055148001	GO:A0A078H798	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0007010	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	InterPro:MAP70
ncoils:Coil	PANTHER:PTHR31246	PANTHER:PTHR31246:SF2	PFAM:PF07058	ProteinID:CDY33736	ProteinID:CDY33736.1
SEG:seg	UniParc:UPI0004EDB601	UniProt:A0A078H798	MapMan:35.1	:	:

Description

BnaA09g45420DBnaA09g45420D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H798]

Coordinates

chrLK032321:+:72052..75488

Molecular Weight (calculated)

67455.1 Da

IEP (calculated)

10.026

GRAVY (calculated)

-0.796

Length

605 amino acids

Sequence
(BLAST)

001: MEERRFVSPS LAVSASYRGG GGGSKGLPRR RPMRPSCDAD NEFLTLLHGS DPVRVELNRL ENEVRDKGRE LSEAQAEIKA LRLSERQREK AVEELTEELG
101: KMSAKLKLIE NLLESKNLEI KKINEEKKAS TAAQFAAEAS LRRVHAAQKD DDMPPIEAIL APLEAELKLA RQEIANLQDD NKSLDRLTKS KEAALLDAER
201: TVQSALAKAS MVDDLQNKNQ ELMKQTEICQ EENKIIDKMH RQKVAEVEKL MQSVRELEEA VLAGGAAANA VRDYQRKFQE MNEERKILER ELARAKVNAN
301: RVATVVANEW KDSNDQVMPV RQWLDERRFL QGEMQQLRDK LSISDRAAKS EAQLKEKFLL RLRVLEESLK RPTSNSNRGT PGVRSSSNGP SRRQSLGGTE
401: TSPKYSSNGS LTKRTPSSQS RSLTASASTV LKHAKGTSIS FDGGTRSLDI NKVLMNRPGS NFNHQSSEGA SRVESASSIQ GEESDEKSKD YDSVPGVLYD
501: LLQKDVITLR KAAHEKDQSL RDKDEAIEML AKKVETLTKA MEIEAKKMRR EVAVMGKEVA AMRVDKGQQD SKTRRISSIS KGSSNTAQLL SGRVSGRIGM
601: TRSTQ

Best Arabidopsis Sequence Match ( AT1G14840.1 )
(BLAST)

001: MEERGFMSPS LAISASYREG GSKGMSRRRS MRPSFDADNE FMNLLHGSDP VRIELNRLEN EVRDKDRELS EGQAEIKALR LSERQREKAV EELTEELGKM
101: AEKLKLIENL LESKNLEIKK INEEKKASMA AQFAAEASLR RVHAAQKDDD MPPIEAILAP LEAELKLSRQ EIAKLQDDNK SLDRLTKSKE AALLDAERTV
201: QSALAKASMV DDLQNKNQEL MKQIEICQEE NRIIDKMHRQ KVAEVEKLMQ SVRELEEAVL AGGAAANAVR DYQRKFQEMN EERKILEREL ARAKVNANRV
301: ATVVANEWKD SNDKVMPVRQ WLEERRFLQG EMQQLRDKLA IADRAAKSEA QLKEKFLLRL RVLEESLKGP TSSSSRGTSV GRSSSNGPTR RQSLGGAETS
401: PKITSNGSLI KRTPSSQLRS LTASASTVLK HAKGTSRSFD GGTRSLDRSK VLINGPRSNF PLNHKSSEGT SRGESPSSIK GEEESADKAT NNDSVPGVLY
501: DLLQKEVITL RKAAHEKDQS LRDKDEAIEM LAKKVETLTK AMDVEAKKMR REVAVMGKEV AAMRVVDKGQ QDSKTRRLSV SKGNTAQLLS GRVSGRIGMT
601: RSTQ

Arabidopsis Description

MAP70.4Microtubule-associated protein 70-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQU7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.