Factsheet for PGSC0003DMT400051425

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400063083

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G68060.1	PGSC0003DMT400063083	AT5G61010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g005330.2.1	Tomato	cytosol	98.72	99.04
PGSC0003DMT400056068	Potato	cytosol	85.9	86.17
PGSC0003DMT400075913	Potato	cytosol	82.37	83.31
KRH49658	Soybean	cytosol	79.33	81.01
KRH70354	Soybean	endoplasmic reticulum	79.33	80.88
KRH60419	Soybean	cytosol, plastid	79.81	80.84
KRH41720	Soybean	cytosol	79.49	80.52
VIT_01s0011g05790.t01	Wine grape	cytosol	81.41	79.75
PGSC0003DMT400038689	Potato	cytosol	38.94	75.47
AT1G68060.1	Thale cress	nucleus, plastid	74.68	74.92
CDX84971	Canola	cytosol	73.56	74.63
Bra004053.1-P	Field mustard	nucleus, plastid	73.72	74.43
Os02t0736100-01	Rice	cytosol	71.31	74.29
CDY07403	Canola	nucleus, plastid	73.56	74.27
CDY04200	Canola	plastid	73.08	73.91
CDY40783	Canola	plastid	72.44	73.74
CDX96050	Canola	nucleus, plastid	73.56	73.44
Bra004279.1-P	Field mustard	nucleus, plastid	73.56	73.44
AT1G14840.1	Thale cress	plastid	70.83	73.18
CDY27573	Canola	nucleus, plastid	73.4	73.16
Bra012493.1-P	Field mustard	nucleus	71.47	72.76
CDY03865	Canola	nucleus	71.79	72.73
CDY01879	Canola	nucleus	72.6	72.6
TraesCS6A01G298800.1	Wheat	cytosol	69.39	72.29
Bra010978.1-P	Field mustard	nucleus	70.67	72.18
TraesCS6B01G328200.1	Wheat	cytosol	66.51	72.17
TraesCS6D01G278500.1	Wheat	cytosol	69.23	72.12
TraesCS7A01G200700.1	Wheat	nucleus	70.03	71.99
EER89530	Sorghum	nucleus	69.87	71.95
TraesCS7B01G107500.1	Wheat	nucleus	69.87	71.83
TraesCS7D01G204000.1	Wheat	nucleus	69.87	71.83
Bra032784.1-P	Field mustard	nucleus	68.43	71.64
Bra026184.1-P	Field mustard	nucleus	68.43	71.64
CDX81676	Canola	plastid	67.95	71.62
CDY45293	Canola	nucleus	68.91	71.55
Bra026800.1-P	Field mustard	nucleus	68.91	71.55
CDY36126	Canola	nucleus	70.51	71.31
Zm00001d044724_P001	Maize	cytosol	69.07	71.12
AT2G01750.2	Thale cress	nucleus	71.79	71.11
CDY51769	Canola	nucleus	68.59	71.1
CDY33736	Canola	nucleus	68.91	71.07
Bra025859.1-P	Field mustard	nucleus	51.44	70.86
Zm00001d037291_P001	Maize	nucleus	68.59	70.63
Os06t0251700-01	Rice	nucleus	68.75	70.56
EES07297	Sorghum	cytosol	66.67	70.51
CDY17639	Canola	nucleus, plastid	70.03	70.14
Bra024854.1-P	Field mustard	nucleus, plastid	70.51	69.84
HORVU7Hr1G041170.1	Barley	nucleus	69.39	69.84
Zm00001d017961_P003	Maize	cytosol	66.03	69.83
CDY36256	Canola	nucleus, plastid	69.39	69.61
AT1G24764.3	Thale cress	endoplasmic reticulum, extracellular	74.52	67.1
HORVU0Hr1G017080.1	Barley	nucleus, plastid	69.55	64.39
PGSC0003DMT400034592	Potato	cytosol	26.6	63.12
CDY24415	Canola	nucleus	23.4	57.25
PGSC0003DMT400038827	Potato	cytosol	40.87	50.49
PGSC0003DMT400038687	Potato	cytosol	23.08	44.86

Protein Annotations

EnsemblPlants:PGSC0003DMT400051425	EnsemblPlantsGene:PGSC0003DMG400019974	EntrezGene:102592543	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0007010	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	InterPro:MAP70
ncoils:Coil	PANTHER:PTHR31246	PANTHER:PTHR31246:SF2	PFAM:PF07058	PGSC:PGSC0003DMG400019974	RefSeq:XP_006364039.1
SEG:seg	UniParc:UPI000295B48A	UniProt:M1BRQ6	MapMan:35.1	:	:

Description

Myosin heavy chain, clone [Source:PGSC_GENE;Acc:PGSC0003DMG400019974]

Coordinates

chr1:-:549351..554780

Molecular Weight (calculated)

69497.2 Da

IEP (calculated)

9.300

GRAVY (calculated)

-0.824

Length

624 amino acids

Sequence
(BLAST)

001: MSEFSGELSE FSSGENGVGG GGGGNVRETT PLTVSASFKE GKSSRRKTAV MRPSLDADEF FNLLHGSDPV KLELNRLENE VRDKDRELTE AQAEIKALKL
101: SERLREKAVE ELTDELSRVD EKLKLTESLL ESKNLEIKKI NDEKKASMAA QFAAEATLRR VHAAQKDDDM PPIEAILAPL EAELKLARQE IAKLQDDNKA
201: LDRLTKSKEA ALLDAERTVQ SALAKASMVD DLQNKNQELM KQIEICQEEN KILDRMHRQK VAEVEKLTQT VRELEEAVLA GGAAANAVRD YQRKVQEMNE
301: ERKTLDRELA RAKVTANRVA TVVANEWKDA NDKVMPVKQW LEERRFLQGE MQTLRDKLAV TERAAKSEAM LKERYQLRLK VLEETLRSSS SATRSTPDGR
401: SSSNGPSRRQ SLGGAENISK LTYNGFLPKR SPSFQLRSSG SSTVLKNAKG TSKSFDGGSR SLDRGKNLLN GTGPNFNSSK SCDGTKDNET ENSSWKASQV
501: EKSNDTPVTE REDTIPGILY DLLQKEVIAL RKAGNEKDQS LKDKDDAIEM LAKKVETLTK AMEVEAKKMR REVAAMEKEV SAMRVEKDQE NRAKRFANSK
601: GPVSSSQLPP GRNVARSGLT RNIQ

Best Arabidopsis Sequence Match ( AT1G24764.1 )
(BLAST)

001: MSDVSGDGDL SATVTEHEVT PQPPVSSATY PSLTVSASYK ESSGGKSSSK RRPIRPSFDA AADNEFITLL HGSDPVKVEL NRLENEVRDK DRELGEANAE
101: IKALRLSERQ REKAVEELTE ELTKLDEKLK LTESILESKN LEIKKINEEK KASMAAQFAA EATLRRVHAA QKDDDMPPIE AILAPLEAEL KLARSEIGKL
201: QEDNRALDRL TKSKEAALLE AERTVEAAMA KAAMVDDLQN KNQELMKQIE ICQEENKILD RMHRQKVAEV EKLTQTVREL EEAVLAGGAA ANAVRDYQRK
301: FQEMNEERKT LDRELARAKV TANRVATVVA NEWKDGNDKV MPVKQWLEER RFLQGEMQQL RDKLAITDRA AKSEAQLKEK FQLRLKVLEE TLRGTSSSAT
401: RNTPEARSMS NGPSRRQSLG GAENLQKFTS NGALSKKAPA SQMRHSLSIN STSVLKNAKG TSKSFDGGTR SVDRGKALLN GPGNYSFNKA TDDSKEAESG
501: NGWKENSEEK PQSEDPEAAT EDSVPGVLYD LLQKEVVSLR KASNEKDQSL KDKDDAIEML AKKVETLTKA MEVEAKKMRR EVAAMEKEVA AMRVEKDQDA
601: RAKRFSNSKS PSNTAQILAG RAAGRSGGLT KSTQ

Arabidopsis Description

ATMAP70-2microtubule-associated proteins 70-2 [Source:TAIR;Acc:AT1G24764]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.