Factsheet for Bra004279.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 3
plastid 2
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra012987.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G68060.1	Bra012987.1-P	AT5G61010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96050	Canola	nucleus, plastid	100.0	100.0
Bra004053.1-P	Field mustard	nucleus, plastid	91.04	92.07
AT1G68060.1	Thale cress	nucleus, plastid	88.96	89.39
Bra010978.1-P	Field mustard	nucleus	82.08	83.96
Bra032784.1-P	Field mustard	nucleus	79.68	83.56
Bra012493.1-P	Field mustard	nucleus	80.96	82.54
KRH49658	Soybean	cytosol	75.84	77.58
KRH70354	Soybean	endoplasmic reticulum	75.36	76.96
KRH41720	Soybean	cytosol	74.72	75.81
KRH60419	Soybean	cytosol, plastid	74.4	75.49
Solyc04g008040.2.1	Tomato	nucleus	74.08	75.04
PGSC0003DMT400075913	Potato	cytosol	74.08	75.04
VIT_01s0011g05790.t01	Wine grape	cytosol	76.16	74.73
Solyc01g005330.2.1	Tomato	cytosol	73.44	73.79
PGSC0003DMT400051425	Potato	cytosol, nucleus, plasma membrane	73.44	73.56
PGSC0003DMT400056068	Potato	cytosol	73.12	73.47
Bra026800.1-P	Field mustard	nucleus	70.56	73.38
Bra026184.1-P	Field mustard	nucleus	69.76	73.15
Solyc05g017980.2.1	Tomato	cytosol	72.64	72.99
Bra025859.1-P	Field mustard	nucleus	52.8	72.85
TraesCS6D01G278500.1	Wheat	cytosol	69.44	72.45
Os02t0736100-01	Rice	cytosol	69.28	72.29
TraesCS6B01G328200.1	Wheat	cytosol	65.76	71.48
TraesCS6A01G298800.1	Wheat	cytosol	68.32	71.29
Bra024854.1-P	Field mustard	nucleus, plastid	71.36	70.79
TraesCS7D01G204000.1	Wheat	nucleus	67.84	69.85
TraesCS7A01G200700.1	Wheat	nucleus	67.68	69.69
TraesCS7B01G107500.1	Wheat	nucleus	67.68	69.69
EER89530	Sorghum	nucleus	67.2	69.31
EES07297	Sorghum	cytosol	65.12	68.98
Zm00001d037291_P001	Maize	nucleus	66.88	68.98
Zm00001d044724_P001	Maize	cytosol	66.4	68.48
Os06t0251700-01	Rice	nucleus	66.4	68.26
Zm00001d017961_P003	Maize	cytosol	64.32	68.14
HORVU7Hr1G041170.1	Barley	nucleus	67.36	67.9
HORVU0Hr1G017080.1	Barley	nucleus, plastid	68.48	63.5
Bra026236.1-P	Field mustard	cytosol	37.6	47.28

Protein Annotations

EnsemblPlants:Bra004279.1	EnsemblPlants:Bra004279.1-P	EnsemblPlantsGene:Bra004279	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0007010	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	InterPro:MAP70
ncoils:Coil	PANTHER:PTHR31246	PANTHER:PTHR31246:SF2	PFAM:PF07058	SEG:seg	UniParc:UPI00025416DA
UniProt:M4CJ95	MapMan:35.1	:	:	:	:

Description

AT1G68060 (E=3e-247) ATMAP70-1 | ATMAP70-1 (microtubule-associated proteins 70-1); microtubule binding

Coordinates

chrA07:-:17757052..17759739

Molecular Weight (calculated)

69599.1 Da

IEP (calculated)

9.274

GRAVY (calculated)

-0.880

Length

625 amino acids

Sequence
(BLAST)

001: MTDVTTDGGF SAETPYPSLT VSASYKDTSS GNGGAKSSSR RRPIRPSFDA ATDNNEFITQ LHGSDPVKVE LNRLENEVRD KDRELGEAHA EIKALRLSER
101: QREKAVEELT DELTKLEEKL KLTESLLQGK NLEIKKINEE KKASMAAQFA AEATLRRVHA AQKDDDMPPI EAILAPLEAE LKLARSEIGK LQEDNRALDR
201: LTKSKEAALL DAERTVQTAM AKAALVDDLQ NKNQELMKQI EICQEENKIL DKMHRQKVAE VEKLTQTVRE LEEAVLAGGA AANAVRDYQR KFQEMNEERK
301: TLDRELARAK VTANRVATVV ANEWKDGNDK VMPVKQWLEE RRFLQGEMQQ LRDKLAISDR AAKSEAQLKE KFQLRLKVLE ETLRGTSSSS IRNTPEGRSM
401: SNGPSRRQSL GGADNLQKFG SNGFLPKKSP SSQMRNAFTS NSTSVLKNAK GTSRSFDGGT RSLDRGKALL NGPGKYSFNK ACEEAKESES SPNAWKEDSE
501: EKPPSELPAP TTEDNVPGVL YDLLQKEVVA LRKSSHEKDQ SLKDKDDAIE MLAKKVETLT KAMEVEAKKM RREVAAMEKE VAAMRVDKDQ DNRAKRSSNT
601: KNPSNTAQIL TGRAAGRSGL TRSTQ

Best Arabidopsis Sequence Match ( AT1G68060.1 )
(BLAST)

001: MSDVSADGGF LSAEQATTPV AIPTPYPSLT VSASYKEKSS GRRRPVRPSF DAAADNEFIT LLHGSDPVKV ELNRLENEVR DKDRELSEAN AEIKALRLSE
101: RQREKACEEL TDELAKLDGK LKLTESLLQS KNLEIKKINE EKKASMAAQF AAEATLRRVH AAQKDDDMPP IEAILAPLEA ELKLARSEIG KLQEDNRALD
201: RLTKSKEAAL LDAERTVETA LAKAALVDDL QNKNQELMKQ IEICQEENKI LDRMHRQKVA EVEKLTQTVR ELEEAVLAGG AAANAVRDYQ RKFQEMNEER
301: KTLDRELARA KVTANRVATV VANEWKDGND KVMPVKQWLE ERRFLQGEMQ QLRDKLAISD RAAKSEAQLK DKFQLRLRVL EETLRGTSSI SIRNTPEGRS
401: MSNGPSRRQS IGGSDNLQKF ASNGFLSKKT PMRNSFTSNS TSVLKNAKGT SKSFDGGTRS LDRGKALLKG PGNYSFNKAC DETKESESPN TWKEDSEEKP
501: PSELPAPATE DNVPGVLYDL LQKEVVALRK SSHEKDQSLK DKDDAIEMLA KKVETLTKAM EVEAKKMRRE VAAMEKEVAA MRVDKDQDNR AKRSSNTKPS
601: SNTAQILAAR AAGRSGLTRS TQ

Arabidopsis Description

MAP70.1Microtubule-associated protein 70-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9X0]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.