Factsheet for HORVU0Hr1G017080.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 3
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
TargetP:	plastid
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G053230.7
HORVU1Hr1G053260.5
HORVU3Hr1G073850.1
HORVU3Hr1G073910.1
HORVU5Hr1G077580.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G68060.1	HORVU1Hr1G053230.7	AT2G45920.1	21798944
AT1G68060.1	HORVU1Hr1G053260.5	AT2G45920.1	21798944
AT1G68060.1	HORVU5Hr1G077580.3	AT2G45920.1	21798944
AT1G68060.1	HORVU3Hr1G073850.1	AT5G61010.1	21798944
AT1G68060.1	HORVU3Hr1G073910.1	AT5G61010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G328200.1	Wheat	cytosol	80.56	94.43
TraesCS6A01G298800.1	Wheat	cytosol	83.23	93.66
TraesCS6D01G278500.1	Wheat	cytosol	82.34	92.65
Os02t0736100-01	Rice	cytosol	75.52	84.97
EES07297	Sorghum	cytosol	71.36	81.53
Zm00001d017961_P003	Maize	cytosol	71.07	81.19
HORVU7Hr1G041170.1	Barley	nucleus	71.07	77.26
KRH49658	Soybean	cytosol	65.28	72.01
VIT_01s0011g05790.t01	Wine grape	cytosol	67.66	71.59
KRH70354	Soybean	endoplasmic reticulum	64.99	71.57
PGSC0003DMT400075913	Potato	cytosol	64.39	70.34
Solyc04g008040.2.1	Tomato	nucleus	64.24	70.18
KRH60419	Soybean	cytosol, plastid	64.09	70.13
Solyc01g005330.2.1	Tomato	cytosol	64.69	70.1
PGSC0003DMT400056068	Potato	cytosol	64.69	70.1
CDX84971	Canola	cytosol	63.95	70.08
Solyc05g017980.2.1	Tomato	cytosol	64.54	69.94
HORVU5Hr1G000150.1	Barley	cytosol, mitochondrion	61.72	69.68
KRH41720	Soybean	cytosol	63.65	69.64
PGSC0003DMT400051425	Potato	cytosol, nucleus, plasma membrane	64.39	69.55
CDY40783	Canola	plastid	63.2	69.49
CDY27573	Canola	nucleus, plastid	64.24	69.17
Bra010978.1-P	Field mustard	nucleus	62.61	69.07
CDY04200	Canola	plastid	63.2	69.04
Bra012493.1-P	Field mustard	nucleus	62.61	68.84
Bra004053.1-P	Field mustard	nucleus, plastid	63.06	68.77
CDY03865	Canola	nucleus	62.61	68.51
Bra004279.1-P	Field mustard	nucleus, plastid	63.5	68.48
CDX96050	Canola	nucleus, plastid	63.5	68.48
CDY07403	Canola	nucleus, plastid	62.76	68.45
AT1G68060.1	Thale cress	nucleus, plastid	62.76	68.01
CDY36126	Canola	nucleus	62.17	67.91
AT1G14840.1	Thale cress	plastid	60.83	67.88
CDY01879	Canola	nucleus	62.76	67.79
Bra032784.1-P	Field mustard	nucleus	59.79	67.62
CDX81676	Canola	plastid	58.61	66.72
Bra026184.1-P	Field mustard	nucleus	58.9	66.61
CDY45293	Canola	nucleus	59.2	66.39
Bra026800.1-P	Field mustard	nucleus	59.2	66.39
CDY51769	Canola	nucleus	59.2	66.28
Bra025859.1-P	Field mustard	nucleus	44.36	66.0
CDY33736	Canola	nucleus	59.2	65.95
CDY36256	Canola	nucleus, plastid	60.68	65.76
Bra024854.1-P	Field mustard	nucleus, plastid	61.42	65.71
CDY17639	Canola	nucleus, plastid	60.68	65.65
AT2G01750.2	Thale cress	nucleus	61.28	65.56
AT1G24764.3	Thale cress	endoplasmic reticulum, extracellular	64.39	62.63
CDY24415	Canola	nucleus	21.07	55.69
HORVU4Hr1G067630.12	Barley	nucleus	30.42	39.05

Protein Annotations

EnsemblPlants:HORVU0Hr1G017080.1	EnsemblPlantsGene:HORVU0Hr1G017080	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0007010
GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	InterPro:MAP70	ncoils:Coil
PANTHER:PTHR31246	PANTHER:PTHR31246:SF4	PFAM:PF07058	SEG:seg	UniParc:UPI000B46D216	UniProt:A0A287E3X9
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chrchrUn:-:91494240..91501963

Molecular Weight (calculated)

75105.2 Da

IEP (calculated)

10.202

GRAVY (calculated)

-0.873

Length

674 amino acids

Sequence
(BLAST)

001: LNPPNTAPSP SPLFKHARAR QQTTREAKQK QSRAPTPRLG FPTPGRHCGH RRRRRTRSSR PRGARFGWWA EAPVPRSEMA DGGEEGNASA QRGSSRRRGA
101: AQVGLDADEL LTLMHGSDPV KVELNRLENE VRDKDRELGE AQAEIKALRL SERAREKAVE ELTDELEKLD EKLKLTESLL DSKNLELKKT NDEKKAAMAA
201: QFAAEATLRR VHAAQKDDDM PPIEAILAPL EAELKLARQE IAKLQEDNRA LDRLTKQKEA ALLEAERTVQ TALAKAAMVD DMQNKNQDLM KQIEICQEEN
301: KILDRLHRQK VAEVEKLSQT VRELEEAVLA GGAAANAVRD YQRKVQEMNE ERKVLDRELA RTKVTANRVA VVVANEWKDG NDKVMPVKQW LEERRFLQGE
401: MQQLRDKLAI AERTARSEAQ VKEKYQWRLK VLEDGLRGPP SGSSRPPTEG RNTSSGSSRR LSLGGADNLS KVSPTGAFMR RSPSFNSRPS LSTGSSLVLK
501: HAKGTSRSFD GGTRSLDRGK VLVNGPHLLN RSTDAVGDCE TTDSWKASGE ERSTETTNSD STDMVSGVLY DMLQKEVVSL RKACHEKDQS LKDKDDAIEM
601: LAKKVDTLTK AMEVEAKKMR REVAAMEKEV SAMRLEKEQE NKAKRLGSLR GPGTVSQALP GRSAPRGGLA RNVQ

Best Arabidopsis Sequence Match ( AT1G24764.1 )
(BLAST)

001: MSDVSGDGDL SATVTEHEVT PQPPVSSATY PSLTVSASYK ESSGGKSSSK RRPIRPSFDA AADNEFITLL HGSDPVKVEL NRLENEVRDK DRELGEANAE
101: IKALRLSERQ REKAVEELTE ELTKLDEKLK LTESILESKN LEIKKINEEK KASMAAQFAA EATLRRVHAA QKDDDMPPIE AILAPLEAEL KLARSEIGKL
201: QEDNRALDRL TKSKEAALLE AERTVEAAMA KAAMVDDLQN KNQELMKQIE ICQEENKILD RMHRQKVAEV EKLTQTVREL EEAVLAGGAA ANAVRDYQRK
301: FQEMNEERKT LDRELARAKV TANRVATVVA NEWKDGNDKV MPVKQWLEER RFLQGEMQQL RDKLAITDRA AKSEAQLKEK FQLRLKVLEE TLRGTSSSAT
401: RNTPEARSMS NGPSRRQSLG GAENLQKFTS NGALSKKAPA SQMRHSLSIN STSVLKNAKG TSKSFDGGTR SVDRGKALLN GPGNYSFNKA TDDSKEAESG
501: NGWKENSEEK PQSEDPEAAT EDSVPGVLYD LLQKEVVSLR KASNEKDQSL KDKDDAIEML AKKVETLTKA MEVEAKKMRR EVAAMEKEVA AMRVEKDQDA
601: RAKRFSNSKS PSNTAQILAG RAAGRSGGLT KSTQ

Arabidopsis Description

ATMAP70-2microtubule-associated proteins 70-2 [Source:TAIR;Acc:AT1G24764]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.