Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G000100.1 | Wheat | cytosol | 93.3 | 96.37 |
| TraesCS5B01G000600.2 | Wheat | cytosol | 92.13 | 94.66 |
| Os12t0640900-01 | Rice | nucleus | 86.26 | 90.83 |
| TraesCS2D01G554500.1 | Wheat | cytosol | 53.1 | 84.76 |
| KXG24157 | Sorghum | nucleus | 81.57 | 84.55 |
| GSMUA_Achr11P... | Banana | cytosol | 61.98 | 73.71 |
| CDX95376 | Canola | cytosol | 7.37 | 70.97 |
| GSMUA_Achr6P11260_001 | Banana | cytosol | 72.53 | 69.73 |
| GSMUA_Achr2P21620_001 | Banana | cytosol | 72.19 | 69.4 |
| GSMUA_Achr10P... | Banana | cytosol | 71.69 | 68.92 |
| HORVU7Hr1G041170.1 | Barley | nucleus | 68.51 | 65.97 |
| HORVU0Hr1G017080.1 | Barley | nucleus, plastid | 69.68 | 61.72 |
| CDX95377 | Canola | cytosol | 6.2 | 58.73 |
| GSMUA_Achr9P15920_001 | Banana | mitochondrion, nucleus | 70.69 | 58.13 |
| GSMUA_Achr11P... | Banana | cytosol | 8.71 | 39.39 |
| HORVU4Hr1G067630.12 | Barley | nucleus | 34.34 | 39.05 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G000150.1 | EnsemblPlantsGene:HORVU5Hr1G000150 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0007010 |
| GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | InterPro:MAP70 | ncoils:Coil |
| PANTHER:PTHR31246 | PANTHER:PTHR31246:SF10 | PFAM:PF07058 | SEG:seg | UniParc:UPI000B47B18D | UniProt:A0A287Q586 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:542765..547067
Molecular Weight (calculated)
64842.2 Da
IEP (calculated)
6.819
GRAVY (calculated)
-0.694
Length
597 amino acids
Sequence
(BLAST)
(BLAST)
001: MADPYGDGRA LRNHQQAPAQ QRPRLKPALE MEDLISLLHG SDPVRVELTR LENDLHYKEK ELGDAQAEIK ALRLSERARE KAVEDLTEEL AKVDGKLKLT
101: ESLLESKNLE AKKINDEKKA ALAAQFAAEA TLRRVHAAQK DDDMPPIEAI LAPLEAELKL ARQEIAKLQD DNRALDRLTK SKEAALLEAE RTVQIALAKA
201: SLVDDLQNKN QELMKQIEIC QEENKILDRM HRQKVAEVEK LTQTVRELEE AVLAGGAAAN AVRDYQRKVQ EMNEEMKTLD RELARAKVSA NRVAVVVANE
301: WKDGNDKVMP VKQWLEERRL LQGEMQQLRD KLAIAERAAR SEAQLKDKFQ LRLKVLEEGL RMSTSRTNAS AARRQSIGGA ESASKTNGFL SKRPSFQMRT
401: SVSTTTTTLV NHAKGASKSF DGGCRSLDRY KGHVNGVGMN VSTDSSEDKE SNNSDEKPSE FTSVESEDTV SGMLYDMLQK EVVALRKACH EKDQSLKDKD
501: DAVEMLAKKV DTLTKAMESE AKKMRRDVAA MEKEVVAMRL EKEQDTKARR FGSSSASASQ VPPGRDSASE XXXXXXXXXX XXXXXXXFST QHVMLLI
101: ESLLESKNLE AKKINDEKKA ALAAQFAAEA TLRRVHAAQK DDDMPPIEAI LAPLEAELKL ARQEIAKLQD DNRALDRLTK SKEAALLEAE RTVQIALAKA
201: SLVDDLQNKN QELMKQIEIC QEENKILDRM HRQKVAEVEK LTQTVRELEE AVLAGGAAAN AVRDYQRKVQ EMNEEMKTLD RELARAKVSA NRVAVVVANE
301: WKDGNDKVMP VKQWLEERRL LQGEMQQLRD KLAIAERAAR SEAQLKDKFQ LRLKVLEEGL RMSTSRTNAS AARRQSIGGA ESASKTNGFL SKRPSFQMRT
401: SVSTTTTTLV NHAKGASKSF DGGCRSLDRY KGHVNGVGMN VSTDSSEDKE SNNSDEKPSE FTSVESEDTV SGMLYDMLQK EVVALRKACH EKDQSLKDKD
501: DAVEMLAKKV DTLTKAMESE AKKMRRDVAA MEKEVVAMRL EKEQDTKARR FGSSSASASQ VPPGRDSASE XXXXXXXXXX XXXXXXXFST QHVMLLI
001: MSDVSGDGDL SATVTEHEVT PQPPVSSATY PSLTVSASYK ESSGGKSSSK RRPIRPSFDA AADNEFITLL HGSDPVKVEL NRLENEVRDK DRELGEANAE
101: IKALRLSERQ REKAVEELTE ELTKLDEKLK LTESILESKN LEIKKINEEK KASMAAQFAA EATLRRVHAA QKDDDMPPIE AILAPLEAEL KLARSEIGKL
201: QEDNRALDRL TKSKEAALLE AERTVEAAMA KAAMVDDLQN KNQELMKQIE ICQEENKILD RMHRQKVAEV EKLTQTVREL EEAVLAGGAA ANAVRDYQRK
301: FQEMNEERKT LDRELARAKV TANRVATVVA NEWKDGNDKV MPVKQWLEER RFLQGEMQQL RDKLAITDRA AKSEAQLKEK FQLRLKVLEE TLRGTSSSAT
401: RNTPEARSMS NGPSRRQSLG GAENLQKFTS NGALSKKAPA SQMRHSLSIN STSVLKNAKG TSKSFDGGTR SVDRGKALLN GPGNYSFNKA TDDSKEAESG
501: NGWKENSEEK PQSEDPEAAT EDSVPGVLYD LLQKEVVSLR KASNEKDQSL KDKDDAIEML AKKVETLTKA MEVEAKKMRR EVAAMEKEVA AMRVEKDQDA
601: RAKRFSNSKS PSNTAQILAG RAAGRSGGLT KSTQ
101: IKALRLSERQ REKAVEELTE ELTKLDEKLK LTESILESKN LEIKKINEEK KASMAAQFAA EATLRRVHAA QKDDDMPPIE AILAPLEAEL KLARSEIGKL
201: QEDNRALDRL TKSKEAALLE AERTVEAAMA KAAMVDDLQN KNQELMKQIE ICQEENKILD RMHRQKVAEV EKLTQTVREL EEAVLAGGAA ANAVRDYQRK
301: FQEMNEERKT LDRELARAKV TANRVATVVA NEWKDGNDKV MPVKQWLEER RFLQGEMQQL RDKLAITDRA AKSEAQLKEK FQLRLKVLEE TLRGTSSSAT
401: RNTPEARSMS NGPSRRQSLG GAENLQKFTS NGALSKKAPA SQMRHSLSIN STSVLKNAKG TSKSFDGGTR SVDRGKALLN GPGNYSFNKA TDDSKEAESG
501: NGWKENSEEK PQSEDPEAAT EDSVPGVLYD LLQKEVVSLR KASNEKDQSL KDKDDAIEML AKKVETLTKA MEVEAKKMRR EVAAMEKEVA AMRVEKDQDA
601: RAKRFSNSKS PSNTAQILAG RAAGRSGGLT KSTQ
Arabidopsis Description
ATMAP70-2microtubule-associated proteins 70-2 [Source:TAIR;Acc:AT1G24764]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.