Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | cytosol | 52.48 | 75.9 |
| Os12t0640900-01 | Rice | nucleus | 58.68 | 75.13 |
| GSMUA_Achr10P... | Banana | cytosol | 64.19 | 75.04 |
| GSMUA_Achr2P21620_001 | Banana | cytosol | 63.36 | 74.07 |
| GSMUA_Achr6P11260_001 | Banana | cytosol | 63.22 | 73.91 |
| KXG24157 | Sorghum | nucleus | 58.26 | 73.44 |
| TraesCS5D01G000100.1 | Wheat | cytosol | 58.13 | 73.01 |
| TraesCS5B01G000600.2 | Wheat | cytosol | 57.58 | 71.94 |
| HORVU5Hr1G000150.1 | Barley | cytosol, mitochondrion | 58.13 | 70.69 |
| TraesCS2D01G554500.1 | Wheat | cytosol | 36.09 | 70.05 |
| GSMUA_Achr11P... | Banana | cytosol | 44.9 | 53.62 |
| GSMUA_Achr11P... | Banana | cytosol | 9.37 | 51.52 |
| GSMUA_Achr7P26720_001 | Banana | cytosol | 33.61 | 47.38 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P15920_001 | EnsemblPlants:GSMUA_Achr9T15920_001 | EnsemblPlantsGene:GSMUA_Achr9G15920_001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0007010 | GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | InterPro:MAP70 |
| ncoils:Coil | PANTHER:PTHR31246 | PANTHER:PTHR31246:SF4 | PFAM:PF07058 | SEG:seg | UniParc:UPI000295118B |
| UniProt:M0U0P9 | MapMan:35.1 | : | : | : | : |
Description
ATMAP70 protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G15920_001]
Coordinates
chr9:-:10606186..10611805
Molecular Weight (calculated)
81700.5 Da
IEP (calculated)
9.229
GRAVY (calculated)
-0.659
Length
726 amino acids
Sequence
(BLAST)
(BLAST)
001: MLNVENTLTR VKLWWADNAR WPSVLGADRI WTRYRKASDA VSLPAVNPTV VWQKRRKSIR SPHGPVTEPE CSETNSLLSL LLWKTKIYNF TLRSKDFKRD
101: ERTTTEEREG LVVGSEMADP SGGGEAELPA TLSGSFKGDG KAASRRRASI RRSLEADEFI NLLHGSDPVK VELNRLENEV RDKDRELGEA QAEIKALKLS
201: ERAREKAVEE LTEELTKVDG KLKLTESILE SKNLEIKKLN DEKKSSMAAQ FAAEATLRRV HAAQKDDDMP PIEAILAPLE AEIKLARQEI AKLQDDNRAL
301: DRLTKSKEAA LLEAERTIEI ALAKASMVDD LQNKNQELMK QIEICQEENK IFDKLHRQKV FEVEKLSLTV RELEEAVLAG GAAANAVRDY QRKVQEMNEE
401: RKTLDRELAR AKVTANRVAV VVANEWKDAN DKVMPVKQWL EERRFMQGEM QQLRDKLAIA DRTARYEAQL KEKYQLRLKV VEEGLRMSSS GSSRTNIEGK
501: SVTNGSTRRQ SIGGAENLSK PLFGGSVVRR SPSFQLRSSL SSSTSAVLKH AKGTSKSFDG GTRSLDRGKV LAIGMSHSLD RSSDGIKDID ASNTCEGIPN
601: EKLCEHNSAD SDDTVSGLLY DMLQKEVITL RKACHEKDQS LKDKDDAIEI LAKKVDTLTK AMEVEAKKMR REVATMEKEV AAMRVEKEQD SRAKRFGSSK
701: GPVHVSQLLP GRYLYKLQDY SIIYMF
101: ERTTTEEREG LVVGSEMADP SGGGEAELPA TLSGSFKGDG KAASRRRASI RRSLEADEFI NLLHGSDPVK VELNRLENEV RDKDRELGEA QAEIKALKLS
201: ERAREKAVEE LTEELTKVDG KLKLTESILE SKNLEIKKLN DEKKSSMAAQ FAAEATLRRV HAAQKDDDMP PIEAILAPLE AEIKLARQEI AKLQDDNRAL
301: DRLTKSKEAA LLEAERTIEI ALAKASMVDD LQNKNQELMK QIEICQEENK IFDKLHRQKV FEVEKLSLTV RELEEAVLAG GAAANAVRDY QRKVQEMNEE
401: RKTLDRELAR AKVTANRVAV VVANEWKDAN DKVMPVKQWL EERRFMQGEM QQLRDKLAIA DRTARYEAQL KEKYQLRLKV VEEGLRMSSS GSSRTNIEGK
501: SVTNGSTRRQ SIGGAENLSK PLFGGSVVRR SPSFQLRSSL SSSTSAVLKH AKGTSKSFDG GTRSLDRGKV LAIGMSHSLD RSSDGIKDID ASNTCEGIPN
601: EKLCEHNSAD SDDTVSGLLY DMLQKEVITL RKACHEKDQS LKDKDDAIEI LAKKVDTLTK AMEVEAKKMR REVATMEKEV AAMRVEKEQD SRAKRFGSSK
701: GPVHVSQLLP GRYLYKLQDY SIIYMF
001: MSDVSGDGDL SATVTEHEVT PQPPVSSATY PSLTVSASYK ESSGGKSSSK RRPIRPSFDA AADNEFITLL HGSDPVKVEL NRLENEVRDK DRELGEANAE
101: IKALRLSERQ REKAVEELTE ELTKLDEKLK LTESILESKN LEIKKINEEK KASMAAQFAA EATLRRVHAA QKDDDMPPIE AILAPLEAEL KLARSEIGKL
201: QEDNRALDRL TKSKEAALLE AERTVEAAMA KAAMVDDLQN KNQELMKQIE ICQEENKILD RMHRQKVAEV EKLTQTVREL EEAVLAGGAA ANAVRDYQRK
301: FQEMNEERKT LDRELARAKV TANRVATVVA NEWKDGNDKV MPVKQWLEER RFLQGEMQQL RDKLAITDRA AKSEAQLKEK FQLRLKVLEE TLRGTSSSAT
401: RNTPEARSMS NGPSRRQSLG GAENLQKFTS NGALSKKAPA SQMRHSLSIN STSVLKNAKG TSKSFDGGTR SVDRGKALLN GPGNYSFNKA TDDSKEAESG
501: NGWKENSEEK PQSEDPEAAT EDSVPGVLYD LLQKEVVSLR KASNEKDQSL KDKDDAIEML AKKVETLTKA MEVEAKKMRR EVAAMEKEVA AMRVEKDQDA
601: RAKRFSNSKS PSNTAQILAG RAAGRSGGLT KSTQ
101: IKALRLSERQ REKAVEELTE ELTKLDEKLK LTESILESKN LEIKKINEEK KASMAAQFAA EATLRRVHAA QKDDDMPPIE AILAPLEAEL KLARSEIGKL
201: QEDNRALDRL TKSKEAALLE AERTVEAAMA KAAMVDDLQN KNQELMKQIE ICQEENKILD RMHRQKVAEV EKLTQTVREL EEAVLAGGAA ANAVRDYQRK
301: FQEMNEERKT LDRELARAKV TANRVATVVA NEWKDGNDKV MPVKQWLEER RFLQGEMQQL RDKLAITDRA AKSEAQLKEK FQLRLKVLEE TLRGTSSSAT
401: RNTPEARSMS NGPSRRQSLG GAENLQKFTS NGALSKKAPA SQMRHSLSIN STSVLKNAKG TSKSFDGGTR SVDRGKALLN GPGNYSFNKA TDDSKEAESG
501: NGWKENSEEK PQSEDPEAAT EDSVPGVLYD LLQKEVVSLR KASNEKDQSL KDKDDAIEML AKKVETLTKA MEVEAKKMRR EVAAMEKEVA AMRVEKDQDA
601: RAKRFSNSKS PSNTAQILAG RAAGRSGGLT KSTQ
Arabidopsis Description
ATMAP70-2microtubule-associated proteins 70-2 [Source:TAIR;Acc:AT1G24764]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.