Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | cytosol | 88.89 | 88.89 |
| GSMUA_Achr11P... | Banana | cytosol | 70.53 | 87.25 |
| GSMUA_Achr2P21620_001 | Banana | cytosol | 87.12 | 87.12 |
| Os12t0640900-01 | Rice | nucleus | 71.01 | 77.78 |
| KXG24157 | Sorghum | nucleus | 71.01 | 76.56 |
| TraesCS5D01G000100.1 | Wheat | cytosol | 70.37 | 75.61 |
| TraesCS5B01G000600.2 | Wheat | cytosol | 70.05 | 74.87 |
| HORVU5Hr1G000150.1 | Barley | cytosol, mitochondrion | 69.73 | 72.53 |
| TraesCS2D01G554500.1 | Wheat | cytosol | 43.0 | 71.39 |
| GSMUA_Achr9P15920_001 | Banana | mitochondrion, nucleus | 73.91 | 63.22 |
| GSMUA_Achr11P... | Banana | cytosol | 53.78 | 54.93 |
| GSMUA_Achr11P... | Banana | cytosol | 11.43 | 53.79 |
| GSMUA_Achr7P26720_001 | Banana | cytosol | 39.45 | 47.57 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P11260_001 | EnsemblPlants:GSMUA_Achr6T11260_001 | EnsemblPlantsGene:GSMUA_Achr6G11260_001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0007010 | GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | InterPro:MAP70 |
| ncoils:Coil | PANTHER:PTHR31246 | PANTHER:PTHR31246:SF4 | PFAM:PF07058 | SEG:seg | UniParc:UPI000296E555 |
| UniProt:M0T624 | MapMan:35.1 | : | : | : | : |
Description
ATMAP70 protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G11260_001]
Coordinates
chr6:+:7483730..7488694
Molecular Weight (calculated)
69293.8 Da
IEP (calculated)
8.443
GRAVY (calculated)
-0.676
Length
621 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDLCDFSAE GFVGEAAVGN ATPQKESAVL TTSSSFKIEG RAASALRRRA SMKPNLEAEE FINMLHGSDP VRVELCRLEN EVRDRDRELS EAQAEIKALR
101: LSERAREKAV EELTEEVNKM DEKLKLTESL LENRNLEIKK INDEKKAALA AQFAAEATLR RVHAAQKDDD MPPIEAILAP LEAELKLARQ EIAKLQDDNR
201: ALDRLTKSKE AALLEAERTV QIALAKASMV DDLQNKNQEL MKQIEICQEE NKILDKMHRQ KVAEVEKLSQ TVRELEEAVL AGGAAANAVR DYQRKVQEMN
301: DEMKTLDREL SRAKVSANRV AVVVANEWKD SNDKVMPVKQ WLEERRFMQG EMQQLRDKLV IAERTARSEA QLKEKFQLRL KVLEDGSRMS ASGTYRTTIE
401: GKSVSNGPSR RQSLGGADNV PKSVNGFLSK RPSFQMRSSV SSSTVLKHAK GASKSFDGGT RSLDRSKVLL TGAGLSLNRS SDATGDGVTH ESWKKIPDEK
501: TNDFPNVDSD DCVSGLLYDM LQKEVITLRK ACHEKDQSLK DKDDAIEMLA KKVDMLTKAM EVEAKKMRRE VAAMEKEVAA MRVEKEQDNK SKRLGGSKGL
601: ANSSQLPPGR AVPRSGLMRN L
101: LSERAREKAV EELTEEVNKM DEKLKLTESL LENRNLEIKK INDEKKAALA AQFAAEATLR RVHAAQKDDD MPPIEAILAP LEAELKLARQ EIAKLQDDNR
201: ALDRLTKSKE AALLEAERTV QIALAKASMV DDLQNKNQEL MKQIEICQEE NKILDKMHRQ KVAEVEKLSQ TVRELEEAVL AGGAAANAVR DYQRKVQEMN
301: DEMKTLDREL SRAKVSANRV AVVVANEWKD SNDKVMPVKQ WLEERRFMQG EMQQLRDKLV IAERTARSEA QLKEKFQLRL KVLEDGSRMS ASGTYRTTIE
401: GKSVSNGPSR RQSLGGADNV PKSVNGFLSK RPSFQMRSSV SSSTVLKHAK GASKSFDGGT RSLDRSKVLL TGAGLSLNRS SDATGDGVTH ESWKKIPDEK
501: TNDFPNVDSD DCVSGLLYDM LQKEVITLRK ACHEKDQSLK DKDDAIEMLA KKVDMLTKAM EVEAKKMRRE VAAMEKEVAA MRVEKEQDNK SKRLGGSKGL
601: ANSSQLPPGR AVPRSGLMRN L
001: MSDVSGDGDL SATVTEHEVT PQPPVSSATY PSLTVSASYK ESSGGKSSSK RRPIRPSFDA AADNEFITLL HGSDPVKVEL NRLENEVRDK DRELGEANAE
101: IKALRLSERQ REKAVEELTE ELTKLDEKLK LTESILESKN LEIKKINEEK KASMAAQFAA EATLRRVHAA QKDDDMPPIE AILAPLEAEL KLARSEIGKL
201: QEDNRALDRL TKSKEAALLE AERTVEAAMA KAAMVDDLQN KNQELMKQIE ICQEENKILD RMHRQKVAEV EKLTQTVREL EEAVLAGGAA ANAVRDYQRK
301: FQEMNEERKT LDRELARAKV TANRVATVVA NEWKDGNDKV MPVKQWLEER RFLQGEMQQL RDKLAITDRA AKSEAQLKEK FQLRLKVLEE TLRGTSSSAT
401: RNTPEARSMS NGPSRRQSLG GAENLQKFTS NGALSKKAPA SQMRHSLSIN STSVLKNAKG TSKSFDGGTR SVDRGKALLN GPGNYSFNKA TDDSKEAESG
501: NGWKENSEEK PQSEDPEAAT EDSVPGVLYD LLQKEVVSLR KASNEKDQSL KDKDDAIEML AKKVETLTKA MEVEAKKMRR EVAAMEKEVA AMRVEKDQDA
601: RAKRFSNSKS PSNTAQILAG RAAGRSGGLT KSTQ
101: IKALRLSERQ REKAVEELTE ELTKLDEKLK LTESILESKN LEIKKINEEK KASMAAQFAA EATLRRVHAA QKDDDMPPIE AILAPLEAEL KLARSEIGKL
201: QEDNRALDRL TKSKEAALLE AERTVEAAMA KAAMVDDLQN KNQELMKQIE ICQEENKILD RMHRQKVAEV EKLTQTVREL EEAVLAGGAA ANAVRDYQRK
301: FQEMNEERKT LDRELARAKV TANRVATVVA NEWKDGNDKV MPVKQWLEER RFLQGEMQQL RDKLAITDRA AKSEAQLKEK FQLRLKVLEE TLRGTSSSAT
401: RNTPEARSMS NGPSRRQSLG GAENLQKFTS NGALSKKAPA SQMRHSLSIN STSVLKNAKG TSKSFDGGTR SVDRGKALLN GPGNYSFNKA TDDSKEAESG
501: NGWKENSEEK PQSEDPEAAT EDSVPGVLYD LLQKEVVSLR KASNEKDQSL KDKDDAIEML AKKVETLTKA MEVEAKKMRR EVAAMEKEVA AMRVEKDQDA
601: RAKRFSNSKS PSNTAQILAG RAAGRSGGLT KSTQ
Arabidopsis Description
ATMAP70-2microtubule-associated proteins 70-2 [Source:TAIR;Acc:AT1G24764]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.