Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G000600.2 | Wheat | cytosol | 97.58 | 97.07 |
| HORVU5Hr1G000150.1 | Barley | cytosol, mitochondrion | 96.37 | 93.3 |
| Os12t0640900-01 | Rice | nucleus | 90.83 | 92.59 |
| KXG24157 | Sorghum | nucleus | 85.81 | 86.11 |
| TraesCS2D01G554500.1 | Wheat | cytosol | 54.67 | 84.49 |
| GSMUA_Achr11P... | Banana | cytosol | 64.71 | 74.5 |
| CDX95376 | Canola | cytosol | 7.61 | 70.97 |
| TraesCS6D01G278500.1 | Wheat | cytosol | 73.53 | 70.95 |
| GSMUA_Achr2P21620_001 | Banana | cytosol | 75.61 | 70.37 |
| GSMUA_Achr6P11260_001 | Banana | cytosol | 75.61 | 70.37 |
| GSMUA_Achr10P... | Banana | cytosol | 74.74 | 69.57 |
| TraesCS7D01G204000.1 | Wheat | nucleus | 71.63 | 68.2 |
| CDX95377 | Canola | cytosol | 6.4 | 58.73 |
| GSMUA_Achr9P15920_001 | Banana | mitochondrion, nucleus | 73.01 | 58.13 |
| GSMUA_Achr11P... | Banana | cytosol | 9.0 | 39.39 |
| TraesCS4D01G244000.1 | Wheat | nucleus | 35.64 | 38.79 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G000100.1 | EnsemblPlantsGene:TraesCS5D01G000100 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0007010 |
| GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | InterPro:MAP70 | ncoils:Coil |
| PANTHER:PTHR31246 | PANTHER:PTHR31246:SF10 | PFAM:PF07058 | SEG:seg | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr5D:+:93819..97390
Molecular Weight (calculated)
64581.9 Da
IEP (calculated)
8.081
GRAVY (calculated)
-0.757
Length
578 amino acids
Sequence
(BLAST)
(BLAST)
001: MADPYGDGRA LRNHPPPAQQ QRPRLKPALE MEDLISLLHG SDPVRVELTR LENDLHYKEK ELGDAQAEIK ALRLSERARE KAVEDLTEEL AKVDGKLKLT
101: ESLLESKNLE AKKINDEKKA ALAAQFAAEA TLRRVHAAQK DDDMPPIEAI LAPLEAELKL ARQEIAKLQD DNRALDRLTK SKEAALLEAE RTVQIALAKA
201: SLVDDLQNKN QELMKQIEIC QEENKILDRM HRQKVAEVEK LTQTVRELEE AVLAGGAAAN AVRDYQRKVQ EMNEEMKTLD RELARAKVSA NRVAVVVANE
301: WKDGNDKVMP VKQWLEERRL LQGEMQQLRD KLAIAERAAR SEAQLKDKFQ LRLKVLEEGL RMSTSRTNAS AARRQSIGGA ESASKTNGFL SKRPSFQMRT
401: SVSTTTTTLV NHAKGASKSF DGGCRSLDRY KGHVNGVGMN VSTDSSEDKE SNNSDEKPSE FTSVESEDTV SGMLYDMLQK EVVALRKACH EKDQSLKDKD
501: DAVEMLAKKV DTLTKAMESE AKKMRRDVAA MEKEVVAMRL EKEQDTKARR FGSSSASANS SQMPPGRTLP RSGSARNM
101: ESLLESKNLE AKKINDEKKA ALAAQFAAEA TLRRVHAAQK DDDMPPIEAI LAPLEAELKL ARQEIAKLQD DNRALDRLTK SKEAALLEAE RTVQIALAKA
201: SLVDDLQNKN QELMKQIEIC QEENKILDRM HRQKVAEVEK LTQTVRELEE AVLAGGAAAN AVRDYQRKVQ EMNEEMKTLD RELARAKVSA NRVAVVVANE
301: WKDGNDKVMP VKQWLEERRL LQGEMQQLRD KLAIAERAAR SEAQLKDKFQ LRLKVLEEGL RMSTSRTNAS AARRQSIGGA ESASKTNGFL SKRPSFQMRT
401: SVSTTTTTLV NHAKGASKSF DGGCRSLDRY KGHVNGVGMN VSTDSSEDKE SNNSDEKPSE FTSVESEDTV SGMLYDMLQK EVVALRKACH EKDQSLKDKD
501: DAVEMLAKKV DTLTKAMESE AKKMRRDVAA MEKEVVAMRL EKEQDTKARR FGSSSASANS SQMPPGRTLP RSGSARNM
001: MEERGFMSPS LAISASYREG GSKGMSRRRS MRPSFDADNE FMNLLHGSDP VRIELNRLEN EVRDKDRELS EGQAEIKALR LSERQREKAV EELTEELGKM
101: AEKLKLIENL LESKNLEIKK INEEKKASMA AQFAAEASLR RVHAAQKDDD MPPIEAILAP LEAELKLSRQ EIAKLQDDNK SLDRLTKSKE AALLDAERTV
201: QSALAKASMV DDLQNKNQEL MKQIEICQEE NRIIDKMHRQ KVAEVEKLMQ SVRELEEAVL AGGAAANAVR DYQRKFQEMN EERKILEREL ARAKVNANRV
301: ATVVANEWKD SNDKVMPVRQ WLEERRFLQG EMQQLRDKLA IADRAAKSEA QLKEKFLLRL RVLEESLKGP TSSSSRGTSV GRSSSNGPTR RQSLGGAETS
401: PKITSNGSLI KRTPSSQLRS LTASASTVLK HAKGTSRSFD GGTRSLDRSK VLINGPRSNF PLNHKSSEGT SRGESPSSIK GEEESADKAT NNDSVPGVLY
501: DLLQKEVITL RKAAHEKDQS LRDKDEAIEM LAKKVETLTK AMDVEAKKMR REVAVMGKEV AAMRVVDKGQ QDSKTRRLSV SKGNTAQLLS GRVSGRIGMT
601: RSTQ
101: AEKLKLIENL LESKNLEIKK INEEKKASMA AQFAAEASLR RVHAAQKDDD MPPIEAILAP LEAELKLSRQ EIAKLQDDNK SLDRLTKSKE AALLDAERTV
201: QSALAKASMV DDLQNKNQEL MKQIEICQEE NRIIDKMHRQ KVAEVEKLMQ SVRELEEAVL AGGAAANAVR DYQRKFQEMN EERKILEREL ARAKVNANRV
301: ATVVANEWKD SNDKVMPVRQ WLEERRFLQG EMQQLRDKLA IADRAAKSEA QLKEKFLLRL RVLEESLKGP TSSSSRGTSV GRSSSNGPTR RQSLGGAETS
401: PKITSNGSLI KRTPSSQLRS LTASASTVLK HAKGTSRSFD GGTRSLDRSK VLINGPRSNF PLNHKSSEGT SRGESPSSIK GEEESADKAT NNDSVPGVLY
501: DLLQKEVITL RKAAHEKDQS LRDKDEAIEM LAKKVETLTK AMDVEAKKMR REVAVMGKEV AAMRVVDKGQ QDSKTRRLSV SKGNTAQLLS GRVSGRIGMT
601: RSTQ
Arabidopsis Description
MAP70.4Microtubule-associated protein 70-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQU7]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.